Factsheet for TraesCS1A01G421700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G014900.1	Wheat	cytosol	92.39	98.38
TraesCS1B01G453100.1	Wheat	cytosol	58.38	97.46
TraesCS1D01G429700.1	Wheat	cytosol	90.36	96.22
AT2G18390.1	Thale cress	cytosol	84.26	89.73
Solyc07g014650.2.1	Tomato	cytosol	76.65	89.35
Bra039613.1-P	Field mustard	cytosol	83.25	88.65
CDY29231	Canola	cytosol	83.25	88.65
CDY36479	Canola	cytosol	82.74	88.11
GSMUA_Achr9P26270_001	Banana	cytosol	82.74	88.11
KRH28677	Soybean	cytosol	82.74	88.11
KRH76824	Soybean	cytosol	82.74	88.11
VIT_04s0023g01820.t01	Wine grape	cytosol	82.23	87.57
Bra024470.1-P	Field mustard	cytosol	81.73	87.03
PGSC0003DMT400043258	Potato	cytosol	41.12	81.82
HORVU5Hr1G004340.2	Barley	cytosol, plastid	94.92	78.57
HORVU5Hr1G002120.6	Barley	cytosol, plastid	94.92	73.62
TraesCS4A01G292900.1	Wheat	cytosol	42.64	67.2
CDY13039	Canola	cytosol	83.25	66.94
TraesCS2A01G235500.1	Wheat	golgi, plastid	43.65	47.51
TraesCS5A01G142100.1	Wheat	cytosol	43.15	46.96
TraesCS3A01G337300.1	Wheat	mitochondrion	43.15	46.7
TraesCS1A01G306200.1	Wheat	mitochondrion	43.15	45.7
TraesCS5A01G467400.1	Wheat	cytosol	44.16	41.23
TraesCS1A01G197800.1	Wheat	golgi	38.58	39.79
TraesCS6A01G268000.1	Wheat	cytosol	38.07	39.27
TraesCS7A01G284000.3	Wheat	cytosol, mitochondrion	38.07	37.88
TraesCS4A01G149200.1	Wheat	cytosol	31.47	33.7
TraesCS6A01G086900.2	Wheat	cytosol	33.5	32.67
TraesCS1A01G069400.1	Wheat	peroxisome	31.47	30.54

Protein Annotations

MapMan:20.3.3.2	MapMan:22.3.2.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	InterPro:IPR024156	InterPro:P-loop_NTPase
PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711	PANTHER:PTHR11711:SF26	SMART:SM00177
SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231
EnsemblPlantsGene:TraesCS1A01G421700	EnsemblPlants:TraesCS1A01G421700.1	TIGR:cd04154	SEG:seg	:	:

Description

No Description!

Coordinates

chr1A:-:577760728..577762543

Molecular Weight (calculated)

22622.4 Da

IEP (calculated)

8.447

GRAVY (calculated)

-0.254

Length

197 amino acids

Sequence
(BLAST)

001: MSSEIRPCFE FKMGLLSIIR KIKRKEKEMR ILMVGLDNSG KTTIVLKING EDTGVISPTL GFNIKTIQYQ KYSLNIWDVG GQKTIRSYWR NYFEQTDGLV
101: WVVDSSDVRR LDDCRTELHN LLKEERLAGS SLLVFANKQD IQGALKPDEI AKVLNLEVMN KDRHWKIVGC SAYTSDGLLQ GFDWLVQDIA SRIYVLD

Best Arabidopsis Sequence Match ( AT2G18390.1 )
(BLAST)

001: MGLLSIIRKI KKKEKEMRIL MVGLDNSGKT TIVLKINGED TSVISPTLGF NIKTIIYQKY TLNIWDVGGQ KTIRSYWRNY FEQTDGLVWV VDSSDLRRLD
101: DCKMELDNLL KEERLAGSSL LILANKQDIQ GALTPDEIGK VLNLESMDKS RHWKIVGCSA YTGEGLLEGF DWLVQDIASR IYMLD

Arabidopsis Description

ARL2TTN5 [Source:UniProtKB/TrEMBL;Acc:A0A178VQD7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.