Factsheet for TraesCS1B01G453100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G013100.1	Wheat	cytosol	98.31	62.7
TraesCS1D01G429700.1	Wheat	cytosol	98.31	62.7
KXG37868	Sorghum	cytosol	95.76	61.08
Os02t0327100-01	Rice	cytosol	94.07	60.0
AT2G18390.1	Thale cress	cytosol	93.22	59.46
Bra039613.1-P	Field mustard	cytosol	92.37	58.92
CDY29231	Canola	cytosol	92.37	58.92
GSMUA_Achr9P26270_001	Banana	cytosol	92.37	58.92
KRH28677	Soybean	cytosol	92.37	58.92
KRH76824	Soybean	cytosol	92.37	58.92
CDY36479	Canola	cytosol	91.53	58.38
TraesCS1A01G421700.1	Wheat	cytosol	97.46	58.38
VIT_04s0023g01820.t01	Wine grape	cytosol	90.68	57.84
Bra024470.1-P	Field mustard	cytosol	89.83	57.3
Solyc07g014650.2.1	Tomato	cytosol	81.36	56.8
PGSC0003DMT400043258	Potato	cytosol	44.07	52.53
HORVU5Hr1G004340.2	Barley	cytosol, plastid	99.15	49.16
HORVU5Hr1G002120.6	Barley	cytosol, plastid	99.15	46.06
CDY13039	Canola	cytosol	92.37	44.49
Zm00001d033414_P001	Maize	extracellular	94.07	43.7
TraesCS3B01G368600.1	Wheat	mitochondrion	49.15	32.04
TraesCS1B01G317000.1	Wheat	mitochondrion	49.15	31.52
TraesCS5B01G140900.1	Wheat	cytosol	48.31	31.49
TraesCS5B01G479100.1	Wheat	golgi	49.15	27.49
TraesCS1B01G212500.1	Wheat	cytosol	42.37	26.18
TraesCS7B01G181400.1	Wheat	cytosol, mitochondrion	42.37	25.25
TraesCS6B01G114900.2	Wheat	mitochondrion	40.68	24.74
TraesCS4B01G164400.1	Wheat	endoplasmic reticulum	31.36	20.11
TraesCS6B01G295200.1	Wheat	plastid	41.53	19.92
TraesCS1B01G087700.1	Wheat	peroxisome	30.51	17.82
TraesCS2B01G191100.2	Wheat	cytosol, plastid	23.73	13.08

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	InterPro:IPR024156	InterPro:P-loop_NTPase	PFAM:PF00025
PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711	PANTHER:PTHR11711:SF26	SMART:SM00177	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	EnsemblPlantsGene:TraesCS1B01G453100	EnsemblPlants:TraesCS1B01G453100.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1B:-:669705594..669707036

Molecular Weight (calculated)

13606.5 Da

IEP (calculated)

9.763

GRAVY (calculated)

-0.388

Length

118 amino acids

Sequence
(BLAST)

001: MGLLSIVRKI KRKEKEMRIL MVGLDNSGKT TIVLKINGED TSVISPTLGF NIKTIQYQKY SLNIWDVGGQ KTIRSYWRNY FEQTDGLVWV VDSSDVRRLD
101: DCRAELHNLL KEERLAGS

Best Arabidopsis Sequence Match ( AT2G18390.1 )
(BLAST)

001: MGLLSIIRKI KKKEKEMRIL MVGLDNSGKT TIVLKINGED TSVISPTLGF NIKTIIYQKY TLNIWDVGGQ KTIRSYWRNY FEQTDGLVWV VDSSDLRRLD
101: DCKMELDNLL KEERLAGSSL LILANKQDIQ GALTPDEIGK VLNLESMDKS RHWKIVGCSA YTGEGLLEGF DWLVQDIASR IYMLD

Arabidopsis Description

ARL2TTN5 [Source:UniProtKB/TrEMBL;Acc:A0A178VQD7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.