CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome

Predictor Summary:

cytosol 3
mitochondrion 4
peroxisome 2
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY03747	Canola	mitochondrion, peroxisome	100.0	100.0
CDY09441	Canola	mitochondrion, peroxisome	100.0	100.0
CDY54291	Canola	mitochondrion, peroxisome	100.0	100.0
CDY11588	Canola	mitochondrion, peroxisome	100.0	100.0
CDY25787	Canola	mitochondrion, peroxisome	100.0	100.0
CDY44152	Canola	mitochondrion, peroxisome	100.0	100.0
AT1G70490.4	Thale cress	mitochondrion, peroxisome	100.0	100.0
CDY41444	Canola	mitochondrion	99.45	99.45
CDX91717	Canola	mitochondrion	99.45	99.45
CDY47137	Canola	peroxisome	99.45	99.45
Bra024604.1-P	Field mustard	mitochondrion	99.45	99.45
CDX93979	Canola	mitochondrion, peroxisome	98.89	98.89
CDY37791	Canola	cytosol	98.34	98.34
CDY27506	Canola	cytosol	98.34	98.34
CDY47221	Canola	mitochondrion	98.34	98.34
CDY51415	Canola	cytosol	98.34	98.34
PGSC0003DMT400003226	Potato	mitochondrion	98.34	98.34
CDX89139	Canola	cytosol	98.34	98.34
CDX80083	Canola	cytosol	98.34	98.34
CDY53050	Canola	cytosol	97.79	97.79
GSMUA_Achr2P11590_001	Banana	mitochondrion	97.79	97.79
TraesCS2A01G235500.1	Wheat	golgi, plastid	97.79	97.79
Os03t0811900-01	Rice	plasma membrane	97.24	97.24
EER96075	Sorghum	mitochondrion	97.24	97.24
Os07t0223100-01	Rice	plasma membrane	97.24	97.24
Os07t0223400-01	Rice	mitochondrion	97.24	97.24
TraesCS2D01G244900.1	Wheat	mitochondrion, peroxisome	97.24	97.24
VIT_14s0066g01080.t01	Wine grape	mitochondrion	97.24	97.24
EER93218	Sorghum	mitochondrion	96.69	96.69
GSMUA_Achr7P18350_001	Banana	cytosol	86.74	94.58
Zm00001d005231_P006	Maize	cytosol	96.69	94.09
KRH36902	Soybean	endoplasmic reticulum	95.58	94.02
GSMUA_Achr10P...	Banana	cytosol	86.19	93.98
Zm00001d023657_P001	Maize	cytosol	24.31	93.62
CDX95712	Canola	cytosol	97.79	93.16
CDX83340	Canola	cytosol	97.24	92.15
CDX68343	Canola	cytosol	92.27	91.76
CDX75849	Canola	cytosol	56.91	89.57
Zm00001d019191_P007	Maize	peroxisome	97.24	88.44
GSMUA_Achr11P...	Banana	cytosol	97.24	88.0
Zm00001d013007_P001	Maize	plastid	96.69	86.21
CDX69567	Canola	mitochondrion	97.79	85.92
CDY09875	Canola	mitochondrion	97.79	83.1
TraesCS5B01G479100.1	Wheat	golgi	96.69	82.94
TraesCS5A01G467400.1	Wheat	cytosol	96.69	82.94
TraesCS5D01G480200.1	Wheat	unclear	96.69	82.94
CDY23500	Canola	cytosol	91.71	77.57
HORVU5Hr1G111500.2	Barley	mitochondrion	96.69	74.79
GSMUA_Achr3P18390_001	Banana	plasma membrane	97.79	73.14
Zm00001d012537_P003	Maize	cytosol	76.24	67.98
CDX75192	Canola	cytosol	60.22	59.89
CDX68781	Canola	cytosol	60.22	59.89
CDX76793	Canola	cytosol	59.67	59.34
CDY34756	Canola	cytosol	59.67	59.34
CDY45596	Canola	cytosol	59.67	59.34
CDY36172	Canola	cytosol	57.46	57.14
CDY48224	Canola	mitochondrion	64.09	56.59
CDX71216	Canola	mitochondrion	64.09	55.5
GSMUA_Achr6P08570_001	Banana	cytosol	98.34	55.45
CDY28739	Canola	cytosol	58.56	55.21
CDX69406	Canola	cytosol	58.56	55.21
CDY43149	Canola	cytosol	58.56	55.21
CDY23463	Canola	cytosol	58.56	55.21
CDY16963	Canola	cytosol	58.56	55.21
CDY53727	Canola	cytosol	53.04	52.46
CDY29751	Canola	cytosol	52.49	51.91
CDY16265	Canola	cytosol	52.49	51.91
CDY36874	Canola	cytosol	52.49	51.91
CDY36479	Canola	cytosol	47.51	46.49
CDY29231	Canola	cytosol	47.51	46.49
CDY13039	Canola	cytosol	47.51	35.1
CDY25962	Canola	mitochondrion	53.04	34.66
CDY31913	Canola	cytosol	35.36	31.07
CDY38908	Canola	cytosol	34.81	30.73
CDY00519	Canola	cytosol	34.81	30.58
CDY32591	Canola	cytosol	34.81	24.9

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	GO:A0A078FHQ2	UniProt:A0A078FHQ2	EnsemblPlants:CDY04706	ProteinID:CDY04706
ProteinID:CDY04706.1	ProteinID:CDY09441.1	ProteinID:CDY11588.1	ProteinID:CDY25787.1	ProteinID:CDY44152.1	ProteinID:CDY54291.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005794	GO:GO:0005886	GO:GO:0007154
GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0046686
EnsemblPlantsGene:GSBRNA2T00119339001	InterPro:IPR024156	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417
PANTHER:PTHR11711	PANTHER:PTHR11711:SF182	SMART:SM00175	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI0000000A7D	:

Description

BnaC05g18830DBnaA02g14900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FHQ2]

Coordinates

chrLK031957:-:27635..29535

Molecular Weight (calculated)

20593.8 Da

IEP (calculated)

6.960

GRAVY (calculated)

-0.191

Length

181 amino acids

Sequence
(BLAST)

001: MGLSFAKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIAGK A

Best Arabidopsis Sequence Match ( AT1G70490.5 )
(BLAST)

Arabidopsis Description

ARF2-AADP-ribosylation factor 2-B [Source:UniProtKB/Swiss-Prot;Acc:P0DH91]
SUBAcon: [mitochondrion,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.