Factsheet for TraesCS2D01G244900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome

Predictor Summary:

mitochondrion 4
peroxisome 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G235500.1	Wheat	golgi, plastid	99.45	99.45
Os07t0223400-01	Rice	mitochondrion	98.89	98.89
Os07t0223100-01	Rice	plasma membrane	98.89	98.89
EER96075	Sorghum	mitochondrion	98.89	98.89
AT2G47170.2	Thale cress	mitochondrion	98.34	98.34
AT1G10630.2	Thale cress	mitochondrion	97.79	97.79
Bra016344.1-P	Field mustard	mitochondrion	97.79	97.79
CDX91717	Canola	mitochondrion	97.79	97.79
KRH56584	Soybean	mitochondrion	97.79	97.79
KRG93262	Soybean	nucleus	97.79	97.79
CDY41444	Canola	mitochondrion	97.79	97.79
AT1G23490.1	Thale cress	mitochondrion, peroxisome	97.24	97.24
VIT_14s0066g01080.t01	Wine grape	mitochondrion	97.24	97.24
PGSC0003DMT400003226	Potato	mitochondrion	97.24	97.24
CDY54291	Canola	mitochondrion, peroxisome	97.24	97.24
CDY44152	Canola	mitochondrion, peroxisome	97.24	97.24
CDY25787	Canola	mitochondrion, peroxisome	97.24	97.24
AT1G70490.4	Thale cress	mitochondrion, peroxisome	97.24	97.24
CDY03747	Canola	mitochondrion, peroxisome	97.24	97.24
CDY04706	Canola	mitochondrion, peroxisome	97.24	97.24
CDY09441	Canola	mitochondrion, peroxisome	97.24	97.24
CDY11588	Canola	mitochondrion, peroxisome	97.24	97.24
CDY47137	Canola	peroxisome	96.69	96.69
Bra024604.1-P	Field mustard	mitochondrion	96.69	96.69
GSMUA_Achr7P18350_001	Banana	cytosol	87.29	95.18
Bra012376.1-P	Field mustard	cytosol	96.69	93.09
TraesCS5D01G150000.1	Wheat	cytosol	93.92	92.9
KRH36902	Soybean	endoplasmic reticulum	93.92	92.39
Bra003954.1-P	Field mustard	cytosol	90.06	90.06
Zm00001d019191_P007	Maize	peroxisome	98.89	89.95
CDX68343	Canola	cytosol	90.06	89.56
TraesCS5D01G480200.1	Wheat	unclear	97.24	83.41
TraesCS5B01G479100.1	Wheat	golgi	96.69	82.94
CDY23500	Canola	cytosol	89.5	75.7
HORVU5Hr1G111500.2	Barley	mitochondrion	96.69	74.79
TraesCS3D01G330500.1	Wheat	cytosol	96.13	69.32
TraesCS1D01G305900.1	Wheat	golgi	96.69	66.54
TraesCS1D01G201300.1	Wheat	cytosol	61.33	58.12
TraesCS6D01G246900.1	Wheat	cytosol	60.22	57.07
TraesCS7D01G282400.1	Wheat	cytosol, mitochondrion	59.67	54.55
TraesCS4D01G152600.1	Wheat	cytosol	53.04	52.17
TraesCS5D01G020800.1	Wheat	cytosol	48.62	47.57
TraesCS1D01G429700.1	Wheat	cytosol	48.07	47.03
TraesCS4D01G018600.1	Wheat	cytosol	30.39	37.67
TraesCS1D01G072000.1	Wheat	peroxisome	35.36	31.53
TraesCS2D01G172000.1	Wheat	peroxisome	32.6	29.65

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	InterPro:IPR024156	InterPro:P-loop_NTPase	PFAM:PF00025
PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711	PANTHER:PTHR11711:SF215	SMART:SM00175	SMART:SM00177
SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231
EnsemblPlantsGene:TraesCS2D01G244900	EnsemblPlants:TraesCS2D01G244900.1	TIGR:cd04150	:	:	:

Description

No Description!

Coordinates

chr2D:+:277672718..277681779

Molecular Weight (calculated)

20582.8 Da

IEP (calculated)

6.960

GRAVY (calculated)

-0.191

Length

181 amino acids

Sequence
(BLAST)

001: MGLAFGKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDSV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSSNIASK A

Best Arabidopsis Sequence Match ( AT2G47170.3 )
(BLAST)

001: MGLSFGKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIASK A

Arabidopsis Description

ARF1ADP-ribosylation factor 1 [Source:UniProtKB/Swiss-Prot;Acc:P36397]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.