Factsheet for TraesCS3D01G330500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G337300.1	Wheat	mitochondrion	71.71	98.9
KRG99354	Soybean	mitochondrion	71.31	98.89
KRH45651	Soybean	mitochondrion	71.31	98.89
KRH69574	Soybean	endoplasmic reticulum, nucleus	71.31	98.89
Os01t0813400-01	Rice	plasma membrane	71.31	98.89
PGSC0003DMT400035158	Potato	mitochondrion	71.31	98.89
Solyc05g005190.2.1	Tomato	nucleus	71.31	98.89
KRG90489	Soybean	mitochondrion	70.92	98.34
KRG96566	Soybean	mitochondrion	70.92	98.34
PGSC0003DMT400042276	Potato	mitochondrion	70.92	98.34
TraesCS1B01G317000.1	Wheat	mitochondrion	71.71	97.83
KRH33780	Soybean	mitochondrion, peroxisome	70.52	97.79
TraesCS1A01G306200.1	Wheat	mitochondrion	72.11	97.31
Zm00001d038533_P001	Maize	plastid	71.31	97.28
VIT_05s0020g00490.t01	Wine grape	cytosol	70.92	96.22
TraesCS2D01G244900.1	Wheat	mitochondrion, peroxisome	69.32	96.13
Bra008746.1-P	Field mustard	mitochondrion	70.52	93.65
TraesCS5D01G150000.1	Wheat	cytosol	67.73	92.9
VIT_01s0127g00440.t01	Wine grape	cytosol, mitochondrion	70.92	90.82
TraesCS5D01G480200.1	Wheat	unclear	72.11	85.78
TraesCS1D01G305900.1	Wheat	golgi	74.5	71.1
VIT_07s0005g02000.t01	Wine grape	cytosol	72.51	66.42
TraesCS1D01G201300.1	Wheat	cytosol	43.03	56.54
TraesCS6D01G246900.1	Wheat	cytosol	42.63	56.02
TraesCS7D01G282400.1	Wheat	cytosol, mitochondrion	43.43	55.05
VIT_14s0060g00690.t01	Wine grape	golgi	72.51	52.91
TraesCS4D01G152600.1	Wheat	cytosol	38.25	52.17
TraesCS5D01G020800.1	Wheat	cytosol	34.26	46.49
TraesCS1D01G429700.1	Wheat	cytosol	33.86	45.95
TraesCS4D01G018600.1	Wheat	cytosol	21.91	37.67
TraesCS1D01G072000.1	Wheat	peroxisome	25.5	31.53
TraesCS2D01G172000.1	Wheat	peroxisome	23.9	30.15

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	InterPro:IPR024156	InterPro:P-loop_NTPase	PFAM:PF00025
PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711	PANTHER:PTHR11711:SF182	SMART:SM00175	SMART:SM00177
SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231
EnsemblPlantsGene:TraesCS3D01G330500	EnsemblPlants:TraesCS3D01G330500.1	TIGR:cd04150	:	:	:

Description

No Description!

Coordinates

chr3D:+:443258383..443260946

Molecular Weight (calculated)

28200.9 Da

IEP (calculated)

6.032

GRAVY (calculated)

-0.115

Length

251 amino acids

Sequence
(BLAST)

001: MRAAFCSADH ANLPVDSMES GLGCFRPRGA STPVLANLFV AVCFPSLESD PIPPLWQIGE PRGAEMGLTF TKLFSRLFAK KEMRILMVGL DAAGKTTILY
101: KLKLGEIVTT IPTIGFNVET VEYKNISFTV WDVGGQDKIR PLWRHYFQNT QGLIFVVDSN DRERVVEARD ELHRMLNEDE LRDAVLLVFA NKQDLPNAMN
201: AAEITDKLGL HSLRQRHWYI QSTCATSGEG LYEGLDWLSN NIANKVCYSL N

Best Arabidopsis Sequence Match ( AT1G10630.1 )
(BLAST)

001: MGLSFAKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIASK A

Arabidopsis Description

ATARFA1FADP-ribosylation factor A1F [Source:UniProtKB/TrEMBL;Acc:Q6ID97]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.