Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 5
- peroxisome 1
- endoplasmic reticulum 1
- golgi 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Os05t0489600-03 | Rice | plasma membrane | 99.45 | 99.45 |
KRG99354 | Soybean | mitochondrion | 98.89 | 98.89 |
KRH45651 | Soybean | mitochondrion | 98.89 | 98.89 |
KRH69574 | Soybean | endoplasmic reticulum, nucleus | 98.89 | 98.89 |
Solyc05g005190.2.1 | Tomato | nucleus | 98.89 | 98.89 |
PGSC0003DMT400035158 | Potato | mitochondrion | 98.89 | 98.89 |
TraesCS3A01G337300.1 | Wheat | mitochondrion | 98.89 | 98.35 |
KRG90489 | Soybean | mitochondrion | 98.34 | 98.34 |
KRG96566 | Soybean | mitochondrion | 98.34 | 98.34 |
PGSC0003DMT400042276 | Potato | mitochondrion | 98.34 | 98.34 |
Os03t0811900-01 | Rice | plasma membrane | 98.34 | 98.34 |
KRH33780 | Soybean | mitochondrion, peroxisome | 97.79 | 97.79 |
Zm00001d038533_P001 | Maize | plastid | 98.89 | 97.28 |
TraesCS1B01G317000.1 | Wheat | mitochondrion | 98.89 | 97.28 |
Os07t0223100-01 | Rice | plasma membrane | 97.24 | 97.24 |
Os07t0223400-01 | Rice | mitochondrion | 97.24 | 97.24 |
Os01t0265100-01 | Rice | plasma membrane, plastid | 97.24 | 97.24 |
TraesCS1A01G306200.1 | Wheat | mitochondrion | 98.89 | 96.24 |
VIT_05s0020g00490.t01 | Wine grape | cytosol | 98.34 | 96.22 |
Bra008746.1-P | Field mustard | mitochondrion | 97.79 | 93.65 |
VIT_01s0127g00440.t01 | Wine grape | cytosol, mitochondrion | 98.34 | 90.82 |
TraesCS3D01G330500.1 | Wheat | cytosol | 98.89 | 71.31 |
VIT_07s0005g02000.t01 | Wine grape | cytosol | 98.34 | 64.96 |
Os08t0248900-01 | Rice | nucleus, plasma membrane | 61.88 | 61.54 |
Os10t0580200-01 | Rice | plasma membrane | 60.22 | 56.77 |
Os02t0699300-01 | Rice | cytosol, extracellular, plastid | 38.67 | 56.45 |
Os11t0586900-02 | Rice | cytosol | 54.14 | 53.26 |
VIT_14s0060g00690.t01 | Wine grape | golgi | 98.34 | 51.74 |
Os02t0128600-01 | Rice | mitochondrion | 55.25 | 51.55 |
Os06t0114200-00 | Rice | plasma membrane | 52.49 | 50.26 |
Os02t0327100-01 | Rice | cytosol | 48.62 | 47.57 |
Os03t0392300-01 | Rice | cytosol | 35.36 | 31.53 |
Os07t0620400-01 | Rice | cytosol | 34.25 | 30.54 |
Protein Annotations
MapMan:22.3.2.1 | Gene3D:3.40.50.300 | EntrezGene:4327591 | EMBL:AK062251 | EMBL:AK065370 | ProteinID:BAB90396.1 |
ProteinID:BAD68219.1 | ProteinID:BAD82682.1 | ProteinID:BAF06513.1 | ProteinID:BAS74894.1 | EMBL:D10859 | ProteinID:EEE55569.1 |
GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015031 |
GO:GO:0016192 | InterPro:IPR024156 | EnsemblPlantsGene:Os01g0813400 | EnsemblPlants:Os01t0813400-01 | InterPro:P-loop_NTPase | PFAM:PF00025 |
PRINTS:PR00328 | PFscan:PS51417 | PANTHER:PTHR11711 | PANTHER:PTHR11711:SF215 | UniProt:Q06396 | SMART:SM00175 |
SMART:SM00177 | SMART:SM00178 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase_ARF | InterPro:Small_GTPase_ARF/SAR |
TIGRFAMs:TIGR00231 | UniParc:UPI0000457DD3 | RefSeq:XP_015618373.1 | : | : | : |
Description
ADP-ribosylation factor 4, ADP-ribosylation factor A1aSimilar to ADP-ribosylation factor 1. (Os01t0813400-01)
Coordinates
chr1:+:34580341..34583532
Molecular Weight (calculated)
20681.9 Da
IEP (calculated)
6.960
GRAVY (calculated)
-0.207
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLTFTKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRERV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIASK A
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIASK A
001: MGLSFAKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIASK A
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIASK A
Arabidopsis Description
ATARFA1FADP-ribosylation factor A1F [Source:UniProtKB/TrEMBL;Acc:Q6ID97]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.