Factsheet for Os07t0223100-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 3
mitochondrion 5
peroxisome 1
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

plastid: 21433289
extracellular: 26072143
plasma membrane: 27800704
plasma membrane: 28056797

msms PMID: 26072143 doi

B Du, Z Wei, Z Wang, X Wang, X Peng, B Du, R Chen, L Zhu, G He

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China., State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China. Electronic address: gche@whu.edu.cn.

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96075	Sorghum	mitochondrion	100.0	100.0
Os07t0223400-01	Rice	mitochondrion	100.0	100.0
TraesCS2A01G235500.1	Wheat	golgi, plastid	99.45	99.45
TraesCS2D01G244900.1	Wheat	mitochondrion, peroxisome	98.89	98.89
Os03t0811900-01	Rice	plasma membrane	98.89	98.89
AT2G47170.2	Thale cress	mitochondrion	98.34	98.34
CDY41444	Canola	mitochondrion	97.79	97.79
KRG93262	Soybean	nucleus	97.79	97.79
KRH56584	Soybean	mitochondrion	97.79	97.79
Os01t0265100-01	Rice	plasma membrane, plastid	97.79	97.79
CDX91717	Canola	mitochondrion	97.79	97.79
Bra016344.1-P	Field mustard	mitochondrion	97.79	97.79
AT1G10630.2	Thale cress	mitochondrion	97.79	97.79
Os01t0813400-01	Rice	plasma membrane	97.24	97.24
PGSC0003DMT400003226	Potato	mitochondrion	97.24	97.24
CDY54291	Canola	mitochondrion, peroxisome	97.24	97.24
AT1G23490.1	Thale cress	mitochondrion, peroxisome	97.24	97.24
CDY25787	Canola	mitochondrion, peroxisome	97.24	97.24
CDY44152	Canola	mitochondrion, peroxisome	97.24	97.24
CDY11588	Canola	mitochondrion, peroxisome	97.24	97.24
CDY09441	Canola	mitochondrion, peroxisome	97.24	97.24
CDY04706	Canola	mitochondrion, peroxisome	97.24	97.24
CDY03747	Canola	mitochondrion, peroxisome	97.24	97.24
AT1G70490.4	Thale cress	mitochondrion, peroxisome	97.24	97.24
CDY47137	Canola	peroxisome	96.69	96.69
Bra024604.1-P	Field mustard	mitochondrion	96.69	96.69
Os05t0489600-03	Rice	plasma membrane	96.69	96.69
VIT_14s0066g01080.t01	Wine grape	mitochondrion	96.13	96.13
GSMUA_Achr7P18350_001	Banana	cytosol	87.29	95.18
Bra012376.1-P	Field mustard	cytosol	96.69	93.09
KRH36902	Soybean	endoplasmic reticulum	93.92	92.39
Zm00001d019191_P007	Maize	peroxisome	100.0	90.95
Bra003954.1-P	Field mustard	cytosol	90.06	90.06
CDX68343	Canola	cytosol	90.06	89.56
TraesCS5B01G479100.1	Wheat	golgi	97.79	83.89
CDY23500	Canola	cytosol	89.5	75.7
HORVU5Hr1G111500.2	Barley	mitochondrion	97.79	75.64
Os08t0248900-01	Rice	nucleus, plasma membrane	61.33	60.99
Os02t0699300-01	Rice	cytosol, extracellular, plastid	39.23	57.26
Os10t0580200-01	Rice	plasma membrane	60.22	56.77
Os11t0586900-02	Rice	cytosol	54.7	53.8
Os02t0128600-01	Rice	mitochondrion	55.8	52.06
Os06t0114200-00	Rice	plasma membrane	53.04	50.79
Os02t0327100-01	Rice	cytosol	49.17	48.11
Os03t0392300-01	Rice	cytosol	35.91	32.02
Os07t0620400-01	Rice	cytosol	34.81	31.03

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	EntrezGene:4342745	EntrezGene:4342746	EMBL:AK242214	EMBL:AK243518
ProteinID:BAC06914.1	ProteinID:BAC45192.1	ProteinID:BAD31195.1	ProteinID:BAF21121.1	ProteinID:BAT00663.1	ProteinID:BAT00664.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	InterPro:IPR024156	EnsemblPlantsGene:Os07g0223100	EnsemblPlants:Os07t0223100-01	InterPro:P-loop_NTPase	PFAM:PF00025
PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711	PANTHER:PTHR11711:SF215	UniProt:Q7F270	SMART:SM00175
SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR
TIGRFAMs:TIGR00231	UniParc:UPI00000AC72C	RefSeq:XP_015647032.1	RefSeq:XP_015647033.1	RefSeq:XP_015647034.1	:

Description

ADP-RIBOSYLATION FACTOR A1CSimilar to ADP-ribosylation factor 1. (Os07t0223100-01)

Coordinates

chr7:+:6809283..6812420

Molecular Weight (calculated)

20580.8 Da

IEP (calculated)

6.960

GRAVY (calculated)

-0.176

Length

181 amino acids

Sequence
(BLAST)

001: MGLAFGKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TTGEGLYEGL DWLSSNIASK A

Best Arabidopsis Sequence Match ( AT2G47170.3 )
(BLAST)

001: MGLSFGKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIASK A

Arabidopsis Description

ARF1ADP-ribosylation factor 1 [Source:UniProtKB/Swiss-Prot;Acc:P36397]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.