CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 5
peroxisome 1
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG93262	Soybean	nucleus	100.0	100.0
PGSC0003DMT400003226	Potato	mitochondrion	99.45	99.45
KRG90489	Soybean	mitochondrion	99.45	99.45
KRG96566	Soybean	mitochondrion	99.45	99.45
GSMUA_Achr2P11590_001	Banana	mitochondrion	98.89	98.89
KRH69574	Soybean	endoplasmic reticulum, nucleus	98.89	98.89
KRH45651	Soybean	mitochondrion	98.89	98.89
KRG99354	Soybean	mitochondrion	98.89	98.89
KRH33780	Soybean	mitochondrion, peroxisome	98.89	98.89
TraesCS2A01G235500.1	Wheat	golgi, plastid	98.34	98.34
Os03t0811900-01	Rice	plasma membrane	98.34	98.34
EER96075	Sorghum	mitochondrion	97.79	97.79
VIT_14s0066g01080.t01	Wine grape	mitochondrion	97.79	97.79
TraesCS2D01G244900.1	Wheat	mitochondrion, peroxisome	97.79	97.79
Os07t0223400-01	Rice	mitochondrion	97.79	97.79
Os07t0223100-01	Rice	plasma membrane	97.79	97.79
EER93218	Sorghum	mitochondrion	97.79	97.79
KRH31758	Soybean	mitochondrion	98.89	97.28
Zm00001d023657_P001	Maize	cytosol	24.86	95.74
GSMUA_Achr7P18350_001	Banana	cytosol	87.29	95.18
Zm00001d005231_P006	Maize	cytosol	97.24	94.62
GSMUA_Achr10P...	Banana	cytosol	86.74	94.58
KRH74584	Soybean	nucleus	98.34	93.68
KRH36902	Soybean	endoplasmic reticulum	95.03	93.48
Zm00001d019191_P007	Maize	peroxisome	97.79	88.94
GSMUA_Achr11P...	Banana	cytosol	97.79	88.5
Zm00001d013007_P001	Maize	plastid	97.24	86.7
TraesCS5D01G480200.1	Wheat	unclear	97.79	83.89
TraesCS5A01G467400.1	Wheat	cytosol	97.79	83.89
KRH77051	Soybean	mitochondrion	83.98	83.52
TraesCS5B01G479100.1	Wheat	golgi	97.24	83.41
KRH69176	Soybean	endoplasmic reticulum	98.89	80.27
HORVU5Hr1G111500.2	Barley	mitochondrion	97.24	75.21
GSMUA_Achr3P18390_001	Banana	plasma membrane	97.79	73.14
Zm00001d012537_P003	Maize	cytosol	76.8	68.47
KRH07000	Soybean	extracellular, golgi	43.09	64.46
KRH18982	Soybean	endoplasmic reticulum	60.77	63.95
KRH02913	Soybean	cytosol	56.35	61.45
KRH77702	Soybean	cytosol	54.14	55.68
GSMUA_Achr6P08570_001	Banana	cytosol	98.34	55.45
KRH27742	Soybean	cytosol	58.56	54.92
KRH24049	Soybean	cytosol	59.12	54.87
KRH29023	Soybean	cytosol	59.12	54.87
KRG92441	Soybean	endoplasmic reticulum	53.59	53.01
KRG92448	Soybean	endoplasmic reticulum	53.59	53.01
KRH34351	Soybean	endoplasmic reticulum	53.59	53.01
KRH34356	Soybean	cytosol, extracellular	38.12	49.64
KRH76824	Soybean	cytosol	48.62	47.57
KRH28677	Soybean	cytosol	48.62	47.57
KRH20906	Soybean	endoplasmic reticulum	37.57	33.33
KRH11380	Soybean	endoplasmic reticulum	37.57	33.33

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	EntrezGene:547532	EMBL:ACUP02002786	EMBL:ACUP02011545	EnsemblPlantsGene:GLYMA_05G006000
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987
UniProt:I1N5H2	InterPro:IPR024156	ProteinID:KRG93262.1	ProteinID:KRG93263.1	ProteinID:KRG93264.1	EnsemblPlants:KRH56584
ProteinID:KRH56584	ProteinID:KRH56584.1	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417
PANTHER:PTHR11711	PANTHER:PTHR11711:SF182	SMART:SM00175	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI000015BBC9	:

Description

hypothetical protein

Coordinates

chr5:+:526050..530851

Molecular Weight (calculated)

20653.9 Da

IEP (calculated)

6.960

GRAVY (calculated)

-0.207

Length

181 amino acids

Sequence
(BLAST)

001: MGLSFTKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIASK A

Best Arabidopsis Sequence Match ( AT1G10630.1 )
(BLAST)

001: MGLSFAKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIASK A

Arabidopsis Description

ATARFA1FADP-ribosylation factor A1F [Source:UniProtKB/TrEMBL;Acc:Q6ID97]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.