Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH34351 | Soybean | endoplasmic reticulum | 98.91 | 98.91 |
| KRG92448 | Soybean | endoplasmic reticulum | 98.36 | 98.36 |
| KRH34356 | Soybean | cytosol, extracellular | 71.04 | 93.53 |
| VIT_05s0020g04460.t01 | Wine grape | cytosol | 59.02 | 90.0 |
| AT3G22950.1 | Thale cress | cytosol | 88.52 | 88.52 |
| Solyc03g005300.2.1 | Tomato | cytosol | 88.52 | 88.52 |
| PGSC0003DMT400034971 | Potato | cytosol | 87.98 | 87.98 |
| Bra039725.1-P | Field mustard | cytosol | 87.43 | 87.43 |
| CDY53727 | Canola | cytosol | 87.43 | 87.43 |
| GSMUA_Achr4P01270_001 | Banana | endoplasmic reticulum | 87.43 | 87.43 |
| CDY16265 | Canola | cytosol | 86.34 | 86.34 |
| CDY36874 | Canola | cytosol | 86.34 | 86.34 |
| Bra036878.1-P | Field mustard | cytosol | 85.79 | 85.79 |
| CDY29751 | Canola | cytosol | 85.79 | 85.79 |
| GSMUA_Achr1P04710_001 | Banana | endoplasmic reticulum, extracellular | 85.25 | 85.25 |
| Os11t0586900-02 | Rice | cytosol | 84.15 | 83.7 |
| Zm00001d052978_P001 | Maize | extracellular | 81.97 | 81.52 |
| EES08754 | Sorghum | cytosol, mitochondrion | 81.97 | 81.52 |
| TraesCS4D01G152600.1 | Wheat | cytosol | 81.42 | 80.98 |
| HORVU4Hr1G038090.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 80.87 | 80.43 |
| TraesCS4B01G164400.1 | Wheat | endoplasmic reticulum | 80.87 | 80.43 |
| TraesCS4A01G149200.1 | Wheat | cytosol | 80.87 | 80.43 |
| KRH56584 | Soybean | mitochondrion | 53.01 | 53.59 |
| KRG90489 | Soybean | mitochondrion | 53.01 | 53.59 |
| KRG93262 | Soybean | nucleus | 53.01 | 53.59 |
| KRG96566 | Soybean | mitochondrion | 53.01 | 53.59 |
| KRH69574 | Soybean | endoplasmic reticulum, nucleus | 53.01 | 53.59 |
| KRH45651 | Soybean | mitochondrion | 53.01 | 53.59 |
| KRG99354 | Soybean | mitochondrion | 53.01 | 53.59 |
| KRH33780 | Soybean | mitochondrion, peroxisome | 53.01 | 53.59 |
| KRH36902 | Soybean | endoplasmic reticulum | 53.01 | 52.72 |
| KRH31758 | Soybean | mitochondrion | 52.46 | 52.17 |
| KRH77051 | Soybean | mitochondrion | 50.82 | 51.1 |
| KRH18982 | Soybean | endoplasmic reticulum | 47.54 | 50.58 |
| KRH74584 | Soybean | nucleus | 52.46 | 50.53 |
| KRH77702 | Soybean | cytosol | 45.36 | 47.16 |
| KRH02913 | Soybean | cytosol | 42.62 | 46.99 |
| KRH29023 | Soybean | cytosol | 48.09 | 45.13 |
| KRH24049 | Soybean | cytosol | 48.09 | 45.13 |
| KRH27742 | Soybean | cytosol | 47.54 | 45.08 |
| KRH69176 | Soybean | endoplasmic reticulum | 52.46 | 43.05 |
| KRH76824 | Soybean | cytosol | 38.8 | 38.38 |
| KRH28677 | Soybean | cytosol | 38.8 | 38.38 |
| KRH07000 | Soybean | extracellular, golgi | 25.14 | 38.02 |
| KRH20906 | Soybean | endoplasmic reticulum | 34.43 | 30.88 |
| KRH11380 | Soybean | endoplasmic reticulum | 34.43 | 30.88 |
Protein Annotations
| EntrezGene:100813814 | MapMan:22.3.2.1 | Gene3D:3.40.50.300 | EMBL:ACUP02012759 | EnsemblPlantsGene:GLYMA_20G211300 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007264 | GO:GO:0008150 | GO:GO:0009987 | UniProt:I1NIB4 |
| InterPro:IPR024156 | EnsemblPlants:KRG92441 | ProteinID:KRG92441 | ProteinID:KRG92441.1 | ProteinID:KRG92442.1 | InterPro:P-loop_NTPase |
| PFAM:PF00025 | PRINTS:PR00328 | PFscan:PS51417 | PANTHER:PTHR11711 | PANTHER:PTHR11711:SF290 | SMART:SM00175 |
| SMART:SM00177 | SMART:SM00178 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase_ARF | InterPro:Small_GTPase_ARF/SAR |
| TIGRFAMs:TIGR00231 | UniParc:UPI000233DC48 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr20:+:44802602..44804695
Molecular Weight (calculated)
20503.6 Da
IEP (calculated)
6.628
GRAVY (calculated)
-0.037
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAMISRFWF LLFPAKEYKI VVVGLDNAGK TTTLYKLHLG EVVTTNPTVG SNVEELVYKN IRFEVWDLGG QERLRTSWAT YYRGTHAVIA VIDSSDRARI
101: SIIKDELFRL LGHEDLQHSV ILVFANKQDI KDAMTPAEIT DALSLHSIKD HDWHIQACCA LSGEGLYDGL GWIAQRVTGK APT
101: SIIKDELFRL LGHEDLQHSV ILVFANKQDI KDAMTPAEIT DALSLHSIKD HDWHIQACCA LSGEGLYDGL GWIAQRVTGK APT
001: MGLSFAKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIAGK A
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIAGK A
Arabidopsis Description
ARF2-AADP-ribosylation factor 2-B [Source:UniProtKB/Swiss-Prot;Acc:P0DH91]
SUBAcon: [mitochondrion,peroxisome]
SUBAcon: [mitochondrion,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.