CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome

Predictor Summary:

plastid 1
mitochondrion 4
peroxisome 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG90489	Soybean	mitochondrion	99.45	99.45
KRG96566	Soybean	mitochondrion	99.45	99.45
KRH45651	Soybean	mitochondrion	98.89	98.89
KRH56584	Soybean	mitochondrion	98.89	98.89
KRH69574	Soybean	endoplasmic reticulum, nucleus	98.89	98.89
KRG93262	Soybean	nucleus	98.89	98.89
KRG99354	Soybean	mitochondrion	98.89	98.89
EES19719	Sorghum	mitochondrion	98.34	98.34
Os05t0489600-03	Rice	plasma membrane	98.34	98.34
PGSC0003DMT400042276	Potato	mitochondrion	98.34	98.34
TraesCS3B01G368600.1	Wheat	mitochondrion	98.34	98.34
Os01t0813400-01	Rice	plasma membrane	97.79	97.79
KRH31758	Soybean	mitochondrion	98.89	97.28
TraesCS3A01G337300.1	Wheat	mitochondrion	97.79	97.25
TraesCS1B01G317000.1	Wheat	mitochondrion	97.79	96.2
Zm00001d038533_P001	Maize	plastid	97.79	96.2
TraesCS1A01G306200.1	Wheat	mitochondrion	97.79	95.16
KRH74584	Soybean	nucleus	98.34	93.68
KRH36902	Soybean	endoplasmic reticulum	94.48	92.93
KRH77051	Soybean	mitochondrion	83.98	83.52
KRH69176	Soybean	endoplasmic reticulum	98.89	80.27
HORVU1Hr1G068790.1	Barley	plastid	98.34	75.42
TraesCS3D01G330500.1	Wheat	cytosol	97.79	70.52
HORVU0Hr1G027130.1	Barley	plasma membrane	98.34	70.08
TraesCS1D01G305900.1	Wheat	golgi	98.34	67.68
KRH07000	Soybean	extracellular, golgi	43.09	64.46
KRH18982	Soybean	endoplasmic reticulum	60.22	63.37
KRH02913	Soybean	cytosol	55.25	60.24
HORVU3Hr1G079700.1	Barley	cytosol	98.34	57.23
KRH77702	Soybean	cytosol	53.59	55.11
KRH27742	Soybean	cytosol	58.01	54.4
KRH29023	Soybean	cytosol	58.56	54.36
KRH24049	Soybean	cytosol	58.56	54.36
KRH34351	Soybean	endoplasmic reticulum	53.59	53.01
KRG92441	Soybean	endoplasmic reticulum	53.59	53.01
KRG92448	Soybean	endoplasmic reticulum	53.59	53.01
KRH34356	Soybean	cytosol, extracellular	38.12	49.64
KRH76824	Soybean	cytosol	47.51	46.49
KRH28677	Soybean	cytosol	47.51	46.49
KRH11380	Soybean	endoplasmic reticulum	38.12	33.82
KRH20906	Soybean	endoplasmic reticulum	38.12	33.82

Protein Annotations

EntrezGene:100781846	MapMan:22.3.2.1	Gene3D:3.40.50.300	UniProt:A0A0R0I1I9	EMBL:ACUP02006555	EnsemblPlantsGene:GLYMA_10G145100
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987
InterPro:IPR024156	ProteinID:KRH33778.1	ProteinID:KRH33779.1	EnsemblPlants:KRH33780	ProteinID:KRH33780	ProteinID:KRH33780.1
ProteinID:KRH33781.1	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711
PANTHER:PTHR11711:SF182	SMART:SM00175	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI0001BA841B	:	:

Description

hypothetical protein

Coordinates

chr10:+:37999747..38003574

Molecular Weight (calculated)

20694.9 Da

IEP (calculated)

6.960

GRAVY (calculated)

-0.222

Length

181 amino acids

Sequence
(BLAST)

001: MGLSFTKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL EWLSNNIANK A

Best Arabidopsis Sequence Match ( AT1G10630.1 )
(BLAST)

001: MGLSFAKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIASK A

Arabidopsis Description

ATARFA1FADP-ribosylation factor A1F [Source:UniProtKB/TrEMBL;Acc:Q6ID97]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.