CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 5
peroxisome 1
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0489600-03	Rice	plasma membrane	100.0	100.0
TraesCS3B01G368600.1	Wheat	mitochondrion	100.0	100.0
Solyc05g005190.2.1	Tomato	nucleus	99.45	99.45
PGSC0003DMT400035158	Potato	mitochondrion	99.45	99.45
KRH69574	Soybean	endoplasmic reticulum, nucleus	99.45	99.45
KRH45651	Soybean	mitochondrion	99.45	99.45
KRG99354	Soybean	mitochondrion	99.45	99.45
KRG90489	Soybean	mitochondrion	98.89	98.89
PGSC0003DMT400042276	Potato	mitochondrion	98.89	98.89
KRG96566	Soybean	mitochondrion	98.89	98.89
KRH33780	Soybean	mitochondrion, peroxisome	98.34	98.34
EER93218	Sorghum	mitochondrion	97.24	97.24
VIT_05s0020g00490.t01	Wine grape	cytosol	98.89	96.76
EER96075	Sorghum	mitochondrion	96.69	96.69
Bra008746.1-P	Field mustard	mitochondrion	98.34	94.18
VIT_01s0127g00440.t01	Wine grape	cytosol, mitochondrion	98.89	91.33
HORVU1Hr1G068790.1	Barley	plastid	100.0	76.69
HORVU0Hr1G027130.1	Barley	plasma membrane	100.0	71.26
TraesCS1D01G305900.1	Wheat	golgi	100.0	68.82
OQU87737	Sorghum	cytosol	98.34	67.17
VIT_07s0005g02000.t01	Wine grape	cytosol	98.89	65.33
EES14799	Sorghum	cytosol, mitochondrion	60.77	60.44
OQU85607	Sorghum	cytosol, mitochondrion	59.12	59.78
HORVU3Hr1G079700.1	Barley	cytosol	100.0	58.2
OQU86657	Sorghum	peroxisome, plastid	97.79	57.65
EER94416	Sorghum	cytosol	60.22	56.19
EES07411	Sorghum	cytosol	58.56	54.64
VIT_14s0060g00690.t01	Wine grape	golgi	98.89	52.03
EES08754	Sorghum	cytosol, mitochondrion	52.49	51.63
EES06219	Sorghum	mitochondrion	54.7	51.03
EER89435	Sorghum	cytosol	50.83	48.68
KXG37868	Sorghum	cytosol	49.17	48.11
EER94751	Sorghum	cytosol	34.81	31.19
EER99714	Sorghum	cytosol	34.81	31.03

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	EntrezGene:8064160	UniProt:C5YZX5	EnsemblPlants:EES19719	ProteinID:EES19719
ProteinID:EES19719.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0006471	GO:GO:0006810	GO:GO:0006886
GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016192	GO:GO:0019538	InterPro:IPR024156	InterPro:P-loop_NTPase	PFAM:PF00025
PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711	PANTHER:PTHR11711:SF182	SMART:SM00175	SMART:SM00177
SMART:SM00178	EnsemblPlantsGene:SORBI_3009G178600	SUPFAM:SSF52540	unigene:Sbi.17819	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF
InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI0000000A3E	RefSeq:XP_002441289.1	:	:

Description

hypothetical protein

Coordinates

chr9:-:53329736..53333614

Molecular Weight (calculated)

20709.0 Da

IEP (calculated)

6.960

GRAVY (calculated)

-0.222

Length

181 amino acids

Sequence
(BLAST)

001: MGLTFTKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRERV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIANK A

Best Arabidopsis Sequence Match ( AT5G14670.3 )
(BLAST)

001: MGLNFTKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIATK A

Arabidopsis Description

ATARFA1BADP-ribosylation factor A1B [Source:UniProtKB/TrEMBL;Acc:Q9LYJ3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.