Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- peroxisome 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER93218 | Sorghum | mitochondrion | 57.98 | 98.34 |
| EER96075 | Sorghum | mitochondrion | 57.98 | 98.34 |
| EES19719 | Sorghum | mitochondrion | 57.65 | 97.79 |
| TraesCS5B01G479100.1 | Wheat | golgi | 59.93 | 87.2 |
| HORVU5Hr1G111500.2 | Barley | mitochondrion | 58.31 | 76.5 |
| OQU87737 | Sorghum | cytosol | 59.61 | 69.06 |
| EES14799 | Sorghum | cytosol, mitochondrion | 35.83 | 60.44 |
| OQU85607 | Sorghum | cytosol, mitochondrion | 34.2 | 58.66 |
| EER94416 | Sorghum | cytosol | 35.18 | 55.67 |
| EES07411 | Sorghum | cytosol | 34.53 | 54.64 |
| EES08754 | Sorghum | cytosol, mitochondrion | 31.27 | 52.17 |
| EES06219 | Sorghum | mitochondrion | 32.25 | 51.03 |
| EER89435 | Sorghum | cytosol | 30.94 | 50.26 |
| KXG37868 | Sorghum | cytosol | 29.64 | 49.19 |
| EER94751 | Sorghum | cytosol | 20.85 | 31.68 |
| EER99714 | Sorghum | cytosol | 20.85 | 31.53 |
Protein Annotations
| MapMan:22.3.2.1 | Gene3D:3.40.50.300 | UniProt:A0A1W0VWX9 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0007264 | GO:GO:0008150 | GO:GO:0009987 | InterPro:IPR024156 | EnsemblPlants:OQU86657 | ProteinID:OQU86657 |
| ProteinID:OQU86657.1 | InterPro:P-loop_NTPase | PFAM:PF00025 | PRINTS:PR00328 | PFscan:PS51417 | PANTHER:PTHR11711 |
| PANTHER:PTHR11711:SF215 | SMART:SM00175 | SMART:SM00177 | SMART:SM00178 | EnsemblPlantsGene:SORBI_3003G122200 | SUPFAM:SSF52540 |
| InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase_ARF | InterPro:Small_GTPase_ARF/SAR | TIGRFAMs:TIGR00231 | UniParc:UPI0009DC91E1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr3:-:11126624..11130716
Molecular Weight (calculated)
35092.1 Da
IEP (calculated)
9.951
GRAVY (calculated)
-0.491
Length
307 amino acids
Sequence
(BLAST)
(BLAST)
001: MHLPTRVNII HSYHTTFFSE KKSSRSVGCT LELQTRSARP PLLDPFHLHR SLPARHHPPR AHVDWAQPPP HQPCLPPPLF EAQRRPPARA STTRLFFFAP
101: PEAEEERERG AARSRAPPRS PRRCGNMGLS FTKLFSRLFA KKEMRILMVG LDAAGKTTIL YKLKLGEIVT TIPTIGFNVE TVEYKNISFT VWDVGGQDKI
201: RPLWRHYFQN TQGLIFVVDS NDRDRVVEAR DELHRMLNED ELRDAVLLVF ANKQDLPNAM NAAEITDKLG LHSLRQRHWY IQSTCATTGE GLYEGLDWLS
301: SNIANKA
101: PEAEEERERG AARSRAPPRS PRRCGNMGLS FTKLFSRLFA KKEMRILMVG LDAAGKTTIL YKLKLGEIVT TIPTIGFNVE TVEYKNISFT VWDVGGQDKI
201: RPLWRHYFQN TQGLIFVVDS NDRDRVVEAR DELHRMLNED ELRDAVLLVF ANKQDLPNAM NAAEITDKLG LHSLRQRHWY IQSTCATTGE GLYEGLDWLS
301: SNIANKA
001: MGLSFGKLFS KLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIANK A
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIANK A
Arabidopsis Description
ARFA1EADP-ribosylation factor A1E [Source:UniProtKB/TrEMBL;Acc:Q9M1P5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.