CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
plastid 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g100860.2.1	Tomato	unclear	67.55	98.89
Zm00001d043113_P001	Maize	plastid	67.92	98.36
EES19719	Sorghum	mitochondrion	67.17	98.34
Bra021387.1-P	Field mustard	cytosol	66.79	97.79
GSMUA_Achr5P07760_001	Banana	mitochondrion	66.42	97.24
EER93218	Sorghum	mitochondrion	66.04	96.69
EER96075	Sorghum	mitochondrion	66.04	96.69
CDX95712	Canola	cytosol	67.17	93.68
CDX83340	Canola	cytosol	66.79	92.67
Bra000443.1-P	Field mustard	cytosol	66.42	91.67
EES14799	Sorghum	cytosol, mitochondrion	41.51	60.44
OQU85607	Sorghum	cytosol, mitochondrion	40.75	60.34
OQU86657	Sorghum	peroxisome, plastid	69.06	59.61
EER94416	Sorghum	cytosol	41.13	56.19
EES07411	Sorghum	cytosol	40.0	54.64
EES08754	Sorghum	cytosol, mitochondrion	35.47	51.09
EES06219	Sorghum	mitochondrion	37.36	51.03
EER89435	Sorghum	cytosol	35.09	49.21
KXG37868	Sorghum	cytosol	33.96	48.65
EER99714	Sorghum	cytosol	23.77	31.03
EER94751	Sorghum	cytosol	23.4	30.69

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	UniProt:A0A1W0W048	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165
GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	InterPro:IPR024156	EnsemblPlants:OQU87737	ProteinID:OQU87737
ProteinID:OQU87737.1	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711
PANTHER:PTHR11711:SF182	SMART:SM00175	SMART:SM00177	SMART:SM00178	EnsemblPlantsGene:SORBI_3003G332401	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI0009DC9284	SEG:seg

Description

hypothetical protein

Coordinates

chr3:+:65682270..65687556

Molecular Weight (calculated)

30260.2 Da

IEP (calculated)

9.051

GRAVY (calculated)

-0.457

Length

265 amino acids

Sequence
(BLAST)

001: MEWAQCVQNL LETVVMEIFT NYRSPPRDNP LGPDRTAPPR APASADPRTQ IAEARRRRAQ GEGGSSRRRR RKAFATVADF LWEEMGLSFG KLFSRLFAKK
101: EMRILMVGLD AAGKTTILYK LKLGEIVTTI PTIGFNVETV EYKNISFTVW DVGGQDKIRP LWRHYFQNTQ GLIFVVDSND RERVVEARDE LHRMLNEDEL
201: RDAVLLVFAN KQDLPNAMNA AEITDKLGLH SLRQRHWYIQ STCATSGEGL YEGLDWLSNN IANKS

Best Arabidopsis Sequence Match ( AT3G62290.2 )
(BLAST)

001: MGLSFGKLFS KLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIANK A

Arabidopsis Description

ARFA1EADP-ribosylation factor A1E [Source:UniProtKB/TrEMBL;Acc:Q9M1P5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.