Factsheet for Bra008746.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 4
peroxisome 1
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG90489	Soybean	mitochondrion	94.71	98.89
KRG99354	Soybean	mitochondrion	94.71	98.89
Solyc05g005190.2.1	Tomato	nucleus	94.71	98.89
EES19719	Sorghum	mitochondrion	94.18	98.34
TraesCS3B01G368600.1	Wheat	mitochondrion	94.18	98.34
Os05t0489600-03	Rice	plasma membrane	94.18	98.34
Bra016344.1-P	Field mustard	mitochondrion	93.65	97.79
Os01t0813400-01	Rice	plasma membrane	93.65	97.79
Bra004475.1-P	Field mustard	cytosol	93.65	97.79
TraesCS3A01G337300.1	Wheat	mitochondrion	93.65	97.25
Bra014403.1-P	Field mustard	cytosol	93.12	97.24
Bra024604.1-P	Field mustard	mitochondrion	93.12	97.24
Bra027153.1-P	Field mustard	cytosol	93.12	97.24
Bra021387.1-P	Field mustard	cytosol	92.59	96.69
TraesCS1B01G317000.1	Wheat	mitochondrion	93.65	96.2
Zm00001d038533_P001	Maize	plastid	93.65	96.2
TraesCS1A01G306200.1	Wheat	mitochondrion	93.65	95.16
Bra016215.1-P	Field mustard	cytosol	91.01	95.03
Bra012376.1-P	Field mustard	cytosol	93.12	93.62
Bra000443.1-P	Field mustard	cytosol	92.06	90.62
Bra003954.1-P	Field mustard	cytosol	86.77	90.61
Bra007917.1-P	Field mustard	cytosol	68.78	86.67
HORVU1Hr1G068790.1	Barley	plastid	94.18	75.42
TraesCS3D01G330500.1	Wheat	cytosol	93.65	70.52
HORVU0Hr1G027130.1	Barley	plasma membrane	94.18	70.08
TraesCS1D01G305900.1	Wheat	golgi	94.18	67.68
VIT_07s0005g02000.t01	Wine grape	cytosol	94.71	65.33
Bra011295.1-P	Field mustard	cytosol	58.2	60.44
Bra007833.1-P	Field mustard	cytosol	57.67	59.89
Bra032062.1-P	Field mustard	cytosol	57.67	59.89
HORVU3Hr1G079700.1	Barley	cytosol	94.18	57.23
Bra008579.1-P	Field mustard	cytosol	56.08	55.21
Bra032015.1-P	Field mustard	cytosol	55.56	54.69
Bra021371.1-P	Field mustard	cytosol	55.56	54.69
Bra039725.1-P	Field mustard	cytosol	50.79	52.46
Bra036878.1-P	Field mustard	cytosol	50.26	51.91
Bra039613.1-P	Field mustard	cytosol	44.44	45.41
Bra024470.1-P	Field mustard	cytosol	43.39	44.32
Bra028298.1-P	Field mustard	cytosol	32.28	30.35
Bra029132.1-P	Field mustard	cytosol	32.28	30.35
Bra036410.1-P	Field mustard	mitochondrion	61.38	27.62

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra008746	EnsemblPlants:Bra008746.1	EnsemblPlants:Bra008746.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	InterPro:IPR024156
UniProt:M4CWZ9	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711
PANTHER:PTHR11711:SF182	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF
InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI00025451A7	:	:	:

Description

AT5G14670 (E=7e-099) ATARFA1B | ATARFA1B (ADP-ribosylation factor A1B); GTP binding / phospholipase activator/ protein binding

Coordinates

chrA10:-:13679206..13680474

Molecular Weight (calculated)

21629.0 Da

IEP (calculated)

7.719

GRAVY (calculated)

-0.282

Length

189 amino acids

Sequence
(BLAST)

001: MGLNFTKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKNVHSLKN QIRPLWRHYF QNTQGLIFVV
101: DSNDRDRVVE ARDELHRMLN EDELRDAVLL VFANKQDLPN AMNAAEITDK LGLHSLRQRH WYIQSTCATS GEGLYEGLDW LSNNIANKA

Best Arabidopsis Sequence Match ( AT5G14670.3 )
(BLAST)

001: MGLNFTKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIATK A

Arabidopsis Description

ATARFA1BADP-ribosylation factor A1B [Source:UniProtKB/TrEMBL;Acc:Q9LYJ3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.