Factsheet for Bra004475.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 3
peroxisome 1
endoplasmic reticulum 2
golgi 2
extracellular 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	peroxisome
Plant-mPloc:	endoplasmic reticulum, golgi
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27506	Canola	cytosol	100.0	100.0
Bra027153.1-P	Field mustard	cytosol	99.45	99.45
Bra014403.1-P	Field mustard	cytosol	99.45	99.45
CDY47221	Canola	mitochondrion	98.89	98.89
Bra016344.1-P	Field mustard	mitochondrion	98.89	98.89
Bra021387.1-P	Field mustard	cytosol	98.89	98.89
GSMUA_Achr5P07760_001	Banana	mitochondrion	97.79	97.79
Bra024604.1-P	Field mustard	mitochondrion	97.79	97.79
Bra016215.1-P	Field mustard	cytosol	96.69	96.69
Bra012376.1-P	Field mustard	cytosol	97.79	94.15
Bra008746.1-P	Field mustard	mitochondrion	97.79	93.65
Bra000443.1-P	Field mustard	cytosol	98.34	92.71
Bra003954.1-P	Field mustard	cytosol	91.16	91.16
Bra007917.1-P	Field mustard	cytosol	72.38	87.33
Bra011295.1-P	Field mustard	cytosol	60.22	59.89
Bra032062.1-P	Field mustard	cytosol	59.67	59.34
Bra007833.1-P	Field mustard	cytosol	59.67	59.34
Bra008579.1-P	Field mustard	cytosol	59.12	55.73
Bra021371.1-P	Field mustard	cytosol	58.56	55.21
Bra032015.1-P	Field mustard	cytosol	58.56	55.21
Bra039725.1-P	Field mustard	cytosol	53.04	52.46
Bra036878.1-P	Field mustard	cytosol	52.49	51.91
Bra039613.1-P	Field mustard	cytosol	48.07	47.03
Bra024470.1-P	Field mustard	cytosol	46.96	45.95
Bra028298.1-P	Field mustard	cytosol	33.7	30.35
Bra029132.1-P	Field mustard	cytosol	33.7	30.35
Bra036410.1-P	Field mustard	mitochondrion	64.09	27.62

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra004475	EnsemblPlants:Bra004475.1	EnsemblPlants:Bra004475.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	InterPro:IPR024156
UniProt:M4CJU1	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711
PANTHER:PTHR11711:SF182	SMART:SM00175	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI00000A4A38	:	:

Description

AT3G62290 (E=4e-102) ATARFA1E | ATARFA1E (ADP-ribosylation factor A1E); GTP binding / phospholipase activator/ protein binding

Coordinates

chrA05:-:321123..322340

Molecular Weight (calculated)

20608.8 Da

IEP (calculated)

6.960

GRAVY (calculated)

-0.217

Length

181 amino acids

Sequence
(BLAST)

001: MGLSFGKLFS KLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIANK A

Best Arabidopsis Sequence Match ( AT3G62290.2 )
(BLAST)

Arabidopsis Description

ARFA1EADP-ribosylation factor A1E [Source:UniProtKB/TrEMBL;Acc:Q9M1P5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.