Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- mitochondrion 1
- cytosol 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH20906 | Soybean | endoplasmic reticulum | 98.04 | 98.04 |
| VIT_00s0215g00070.t01 | Wine grape | endoplasmic reticulum | 81.86 | 81.46 |
| Solyc10g074630.1.1 | Tomato | cytosol | 75.98 | 80.31 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum | 78.92 | 79.31 |
| CDY31913 | Canola | cytosol | 79.9 | 79.13 |
| CDY00519 | Canola | cytosol | 79.41 | 78.64 |
| Bra028298.1-P | Field mustard | cytosol | 77.45 | 78.61 |
| CDY38908 | Canola | cytosol | 77.94 | 77.56 |
| AT5G52210.2 | Thale cress | cytosol | 77.94 | 77.56 |
| GSMUA_Achr5P00190_001 | Banana | extracellular | 76.96 | 77.34 |
| Bra029132.1-P | Field mustard | cytosol | 75.98 | 77.11 |
| EER99714 | Sorghum | cytosol | 73.04 | 73.4 |
| Os03t0392300-01 | Rice | cytosol | 73.04 | 73.4 |
| VIT_00s0189g00080.t01 | Wine grape | cytosol | 52.45 | 71.81 |
| Os07t0620400-01 | Rice | cytosol | 71.08 | 71.43 |
| VIT_19s0027g00160.t01 | Wine grape | cytosol, extracellular | 44.61 | 69.47 |
| Zm00001d029408_P001 | Maize | endoplasmic reticulum | 68.63 | 69.31 |
| EER94751 | Sorghum | cytosol | 68.63 | 69.31 |
| TraesCS1A01G069400.1 | Wheat | peroxisome | 67.65 | 67.98 |
| TraesCS1D01G072000.1 | Wheat | peroxisome | 67.16 | 67.49 |
| TraesCS1B01G087700.1 | Wheat | peroxisome | 66.18 | 66.83 |
| HORVU1Hr1G014610.1 | Barley | cytosol | 66.18 | 66.5 |
| Zm00001d022172_P001 | Maize | golgi, peroxisome | 73.04 | 63.4 |
| CDY32591 | Canola | cytosol | 77.94 | 62.85 |
| TraesCS2D01G172000.1 | Wheat | peroxisome | 61.27 | 62.81 |
| PGSC0003DMT400043326 | Potato | cytosol | 71.08 | 61.18 |
| TraesCS2B01G191100.2 | Wheat | cytosol, plastid | 58.33 | 55.61 |
| KRH18982 | Soybean | endoplasmic reticulum | 32.84 | 38.95 |
| KRH33780 | Soybean | mitochondrion, peroxisome | 33.82 | 38.12 |
| KRG90489 | Soybean | mitochondrion | 33.33 | 37.57 |
| KRH45651 | Soybean | mitochondrion | 33.33 | 37.57 |
| KRH56584 | Soybean | mitochondrion | 33.33 | 37.57 |
| KRH69574 | Soybean | endoplasmic reticulum, nucleus | 33.33 | 37.57 |
| KRG96566 | Soybean | mitochondrion | 33.33 | 37.57 |
| KRG99354 | Soybean | mitochondrion | 33.33 | 37.57 |
| KRG93262 | Soybean | nucleus | 33.33 | 37.57 |
| KRH36902 | Soybean | endoplasmic reticulum | 33.82 | 37.5 |
| KRH28677 | Soybean | cytosol | 33.82 | 37.3 |
| KRH76824 | Soybean | cytosol | 33.82 | 37.3 |
| KRH31758 | Soybean | mitochondrion | 33.33 | 36.96 |
| KRH02913 | Soybean | cytosol | 28.92 | 35.54 |
| KRH74584 | Soybean | nucleus | 32.84 | 35.26 |
| KRH77051 | Soybean | mitochondrion | 31.37 | 35.16 |
| KRG92448 | Soybean | endoplasmic reticulum | 30.88 | 34.43 |
| KRG92441 | Soybean | endoplasmic reticulum | 30.88 | 34.43 |
| KRH34351 | Soybean | endoplasmic reticulum | 30.88 | 34.43 |
| KRH24049 | Soybean | cytosol | 29.9 | 31.28 |
| KRH77702 | Soybean | cytosol | 26.96 | 31.25 |
| KRH27742 | Soybean | cytosol | 29.41 | 31.09 |
| KRH34356 | Soybean | cytosol, extracellular | 21.08 | 30.94 |
| KRH29023 | Soybean | cytosol | 29.41 | 30.77 |
| KRH69176 | Soybean | endoplasmic reticulum | 33.33 | 30.49 |
| KRH07000 | Soybean | extracellular, golgi | 16.18 | 27.27 |
Protein Annotations
| EntrezGene:100785527 | Gene3D:3.40.50.300 | MapMan:35.1 | EMBL:ACUP02009206 | EnsemblPlantsGene:GLYMA_15G104200 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007264 | GO:GO:0008150 | GO:GO:0009987 | UniProt:I1MFE4 |
| InterPro:IPR024156 | EnsemblPlants:KRH11380 | ProteinID:KRH11380 | ProteinID:KRH11380.1 | InterPro:P-loop_NTPase | PFAM:PF00025 |
| PRINTS:PR00328 | PFscan:PS51417 | PANTHER:PTHR11711 | PANTHER:PTHR11711:SF218 | SMART:SM00175 | SMART:SM00177 |
| SMART:SM00178 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase_ARF | InterPro:Small_GTPase_ARF/SAR | TIGRFAMs:TIGR00231 |
| UniParc:UPI0001BA9108 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr15:-:8150772..8154379
Molecular Weight (calculated)
22936.9 Da
IEP (calculated)
5.412
GRAVY (calculated)
-0.081
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MFSLFYGLWK YLFSKMELHV LILGIDKAGK TTLLEKMKSV YSNIEGIPPD RIIPTVGLNI GRIEVANSKL VFWDLGGQPG LRSIWEKYYE EAHAVIFVVD
101: ASCPSRFEDA KSALEKVLRH EDLQGAPLLI LANKQDIPEA VSADELARYL DLKKLDERVS MFEAVSAYDG MGIRESAEWL VEVMERSKRT EMLRARAGAM
201: GPGP
101: ASCPSRFEDA KSALEKVLRH EDLQGAPLLI LANKQDIPEA VSADELARYL DLKKLDERVS MFEAVSAYDG MGIRESAEWL VEVMERSKRT EMLRARAGAM
201: GPGP
001: MFSLMSGLWS YMFSKTEFNV LILGIDKAGK TTFLEKLKTI YSISEGLPHD RIVPTVGLNI GRIEVSNAKI VFWDLGGQPG LRSIWEKYYE EAHALIYLID
101: AACPTRFEDS KSALEKALRH EDLQGAPLLI LANKQDLTNA VSAEELDRYL DLKKLDERVY MFEAVSGYDG RGIKESIEWL VGVMEKSKRT ESLRARAGYT
201: PVPNS
101: AACPTRFEDS KSALEKALRH EDLQGAPLLI LANKQDLTNA VSAEELDRYL DLKKLDERVY MFEAVSGYDG RGIKESIEWL VGVMEKSKRT ESLRARAGYT
201: PVPNS
Arabidopsis Description
ATARLB1At5g52210 [Source:UniProtKB/TrEMBL;Acc:Q38921]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.