Factsheet for Zm00001d023657_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d005231_P006	Maize	cytosol	100.0	25.27
Zm00001d008295_P002	Maize	plastid	95.74	24.86
AT2G47170.2	Thale cress	mitochondrion	95.74	24.86
PGSC0003DMT400003226	Potato	mitochondrion	95.74	24.86
KRH56584	Soybean	mitochondrion	95.74	24.86
AT1G10630.2	Thale cress	mitochondrion	95.74	24.86
KRG93262	Soybean	nucleus	95.74	24.86
AT1G23490.1	Thale cress	mitochondrion, peroxisome	93.62	24.31
CDY54291	Canola	mitochondrion, peroxisome	93.62	24.31
CDY47137	Canola	peroxisome	93.62	24.31
CDY44152	Canola	mitochondrion, peroxisome	93.62	24.31
CDY41444	Canola	mitochondrion	93.62	24.31
CDY25787	Canola	mitochondrion, peroxisome	93.62	24.31
CDY11588	Canola	mitochondrion, peroxisome	93.62	24.31
CDY09441	Canola	mitochondrion, peroxisome	93.62	24.31
CDY04706	Canola	mitochondrion, peroxisome	93.62	24.31
CDY03747	Canola	mitochondrion, peroxisome	93.62	24.31
CDX91717	Canola	mitochondrion	93.62	24.31
AT1G70490.4	Thale cress	mitochondrion, peroxisome	93.62	24.31
Bra016344.1-P	Field mustard	mitochondrion	93.62	24.31
Bra024604.1-P	Field mustard	mitochondrion	93.62	24.31
Zm00001d043113_P001	Maize	plastid	93.62	24.04
Zm00001d038533_P001	Maize	plastid	93.62	23.91
VIT_14s0066g01080.t01	Wine grape	mitochondrion	91.49	23.76
Zm00001d019191_P007	Maize	peroxisome	100.0	23.62
Bra012376.1-P	Field mustard	cytosol	93.62	23.4
Zm00001d013007_P001	Maize	plastid	97.87	22.66
Bra003954.1-P	Field mustard	cytosol	87.23	22.65
CDX68343	Canola	cytosol	87.23	22.53
KRH36902	Soybean	endoplasmic reticulum	87.23	22.28
TraesCS5B01G479100.1	Wheat	golgi	97.87	21.8
HORVU5Hr1G111500.2	Barley	mitochondrion	97.87	19.66
CDY23500	Canola	cytosol	85.11	18.69
Zm00001d052978_P001	Maize	extracellular	55.32	14.13
Zm00001d012537_P003	Maize	cytosol	59.57	13.79
Zm00001d017650_P002	Maize	cytosol	51.06	13.48
Zm00001d015121_P002	Maize	mitochondrion	55.32	13.4
Zm00001d030157_P001	Maize	extracellular	48.94	11.86
Zm00001d051546_P001	Maize	cytosol	46.81	11.34
Zm00001d017717_P001	Maize	cytosol	48.94	10.41
Zm00001d044868_P001	Maize	cytosol	40.43	10.05
Zm00001d033414_P001	Maize	extracellular	46.81	8.66
Zm00001d029408_P001	Maize	endoplasmic reticulum	27.66	6.44
Zm00001d022172_P001	Maize	golgi, peroxisome	29.79	5.96

Protein Annotations

EnsemblPlants:Zm00001d023657_P001	EnsemblPlants:Zm00001d023657_T001	EnsemblPlantsGene:Zm00001d023657	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005525	InterPro:P-loop_NTPase	InterPro:Small_GTPase_ARF/SAR	PANTHER:PTHR11711	PANTHER:PTHR11711:SF215
PFAM:PF00025	ProteinID:AQK39741.1	SUPFAM:SSF52540	UniParc:UPI0008443FBC	UniProt:A0A1D6IUP5	MapMan:35.1

Description

No Description!

Coordinates

chr10:-:13783362..13783674

Molecular Weight (calculated)

5267.2 Da

IEP (calculated)

6.500

GRAVY (calculated)

-0.417

Length

47 amino acids

Sequence
(BLAST)

1: MNAAEITDKL GLHSLRQRHW YIQSTCATTG EGLYEGLDWL SSNIASK

Best Arabidopsis Sequence Match ( AT5G14670.1 )
(BLAST)

001: MGLNFTKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIATK VNNLNIPF

Arabidopsis Description

ATARFA1BADP-ribosylation factor A1B [Source:UniProtKB/TrEMBL;Acc:Q9LYJ3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.