Factsheet for TraesCS5D01G020800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G013100.1	Wheat	cytosol	98.92	98.92
TraesCS1D01G429700.1	Wheat	cytosol	97.84	97.84
AT2G18390.1	Thale cress	cytosol	90.81	90.81
Solyc07g014650.2.1	Tomato	cytosol	82.7	90.53
Bra039613.1-P	Field mustard	cytosol	89.73	89.73
CDY29231	Canola	cytosol	89.73	89.73
CDY36479	Canola	cytosol	89.19	89.19
GSMUA_Achr9P26270_001	Banana	cytosol	89.19	89.19
KRH28677	Soybean	cytosol	89.19	89.19
KRH76824	Soybean	cytosol	89.19	89.19
VIT_04s0023g01820.t01	Wine grape	cytosol	88.65	88.65
Bra024470.1-P	Field mustard	cytosol	88.11	88.11
PGSC0003DMT400043258	Potato	cytosol	44.32	82.83
HORVU5Hr1G004340.2	Barley	cytosol, plastid	100.0	77.73
HORVU5Hr1G002120.6	Barley	cytosol, plastid	99.46	72.44
CDY13039	Canola	cytosol	89.73	67.76
TraesCS4D01G018600.1	Wheat	cytosol	51.89	65.75
TraesCS2D01G244900.1	Wheat	mitochondrion, peroxisome	47.57	48.62
TraesCS5D01G150000.1	Wheat	cytosol	46.49	46.99
TraesCS5D01G480200.1	Wheat	unclear	47.57	41.71
TraesCS1D01G201300.1	Wheat	cytosol	42.16	40.84
TraesCS6D01G246900.1	Wheat	cytosol	41.62	40.31
TraesCS7D01G282400.1	Wheat	cytosol, mitochondrion	41.08	38.38
TraesCS3D01G330500.1	Wheat	cytosol	46.49	34.26
TraesCS4D01G152600.1	Wheat	cytosol	34.05	34.24
TraesCS1D01G305900.1	Wheat	golgi	46.49	32.7
TraesCS1D01G072000.1	Wheat	peroxisome	33.51	30.54
TraesCS2D01G172000.1	Wheat	peroxisome	31.89	29.65

Protein Annotations

MapMan:20.3.3.2	MapMan:22.3.2.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	InterPro:IPR024156	InterPro:P-loop_NTPase
PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711	PANTHER:PTHR11711:SF26	SMART:SM00177
SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231
EnsemblPlantsGene:TraesCS5D01G020800	EnsemblPlants:TraesCS5D01G020800.1	TIGR:cd04154	SEG:seg	:	:

Description

No Description!

Coordinates

chr5D:+:13715569..13718396

Molecular Weight (calculated)

21136.6 Da

IEP (calculated)

8.651

GRAVY (calculated)

-0.235

Length

185 amino acids

Sequence
(BLAST)

001: MGLLSIIRKI KRKEKEMRIL MVGLDNSGKT TIVLKINGED TSVISPTLGF NIKTIQYQKY SLNIWDVGGQ KTIRSYWRNY FEQTDGLVWV VDSSDVRRLD
101: DCRAELHNLL KEERLAGSSL LVFANKQDIQ GALKPDEIAK VLNLEVMNKD RHWKIVGCSA YTGDGLLQGF DWLVQDIASR IYVLD

Best Arabidopsis Sequence Match ( AT2G18390.1 )
(BLAST)

001: MGLLSIIRKI KKKEKEMRIL MVGLDNSGKT TIVLKINGED TSVISPTLGF NIKTIIYQKY TLNIWDVGGQ KTIRSYWRNY FEQTDGLVWV VDSSDLRRLD
101: DCKMELDNLL KEERLAGSSL LILANKQDIQ GALTPDEIGK VLNLESMDKS RHWKIVGCSA YTGEGLLEGF DWLVQDIASR IYMLD

Arabidopsis Description

ARL2TTN5 [Source:UniProtKB/TrEMBL;Acc:A0A178VQD7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.