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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 5
  • mitochondrion 1
  • endoplasmic reticulum 3
  • golgi 3
  • extracellular 2
  • vacuole 2
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, secretory
BaCelLo:cytosol
EpiLoc:cytosol
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:endoplasmic reticulum, golgi
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra011295.1-P Field mustard cytosol 100.0 100.0
CDX68781 Canola cytosol 100.0 100.0
CDY45596 Canola cytosol 97.25 97.25
CDY34756 Canola cytosol 97.25 97.25
CDX76793 Canola cytosol 96.7 96.7
KRH02913 Soybean cytosol 85.71 93.98
CDY36172 Canola cytosol 93.96 93.96
KRH18982 Soybean endoplasmic reticulum 88.46 93.6
Solyc07g006640.2.1 Tomato plastid 93.41 93.41
VIT_04s0008g07360.t01 Wine grape cytosol, mitochondrion 91.21 91.71
EES14799 Sorghum cytosol, mitochondrion 91.21 91.21
GSMUA_Achr10P... Banana cytosol, mitochondrion 90.66 90.66
GSMUA_Achr11P... Banana cytosol, mitochondrion 90.66 90.66
Os08t0248900-01 Rice nucleus, plasma membrane 90.11 90.11
HORVU7Hr1G061220.1 Barley cytosol, mitochondrion 89.56 89.56
TraesCS7B01G181400.1 Wheat cytosol, mitochondrion 89.56 82.32
TraesCS7D01G282400.1 Wheat cytosol, mitochondrion 89.56 82.32
TraesCS7A01G284000.3 Wheat cytosol, mitochondrion 89.01 81.82
PGSC0003DMT400070636 Potato cytosol, mitochondrion 85.71 61.42
CDY51415 Canola cytosol 59.89 60.22
CDY47221 Canola mitochondrion 59.89 60.22
CDY47137 Canola peroxisome 59.89 60.22
CDY37791 Canola cytosol 59.89 60.22
CDY44152 Canola mitochondrion, peroxisome 59.89 60.22
CDY41444 Canola mitochondrion 59.89 60.22
CDY53050 Canola cytosol 59.89 60.22
CDY27506 Canola cytosol 59.89 60.22
CDY54291 Canola mitochondrion, peroxisome 59.89 60.22
CDY25787 Canola mitochondrion, peroxisome 59.89 60.22
CDY11588 Canola mitochondrion, peroxisome 59.89 60.22
CDY09441 Canola mitochondrion, peroxisome 59.89 60.22
CDY04706 Canola mitochondrion, peroxisome 59.89 60.22
CDY03747 Canola mitochondrion, peroxisome 59.89 60.22
CDX93979 Canola mitochondrion, peroxisome 59.89 60.22
CDX91717 Canola mitochondrion 59.89 60.22
CDX89139 Canola cytosol 59.89 60.22
CDX80083 Canola cytosol 59.89 60.22
CDX68343 Canola cytosol 58.79 58.79
CDX75849 Canola cytosol 36.26 57.39
CDX95712 Canola cytosol 59.89 57.37
CDX83340 Canola cytosol 59.89 57.07
CDY43149 Canola cytosol 57.14 54.17
CDY28739 Canola cytosol 57.14 54.17
CDY23463 Canola cytosol 56.59 53.65
CDX69567 Canola mitochondrion 60.44 53.4
CDX69406 Canola cytosol 56.04 53.12
CDY16963 Canola cytosol 56.04 53.12
CDY09875 Canola mitochondrion 60.44 51.64
CDY23500 Canola cytosol 57.14 48.6
CDY53727 Canola cytosol 48.35 48.09
CDY16265 Canola cytosol 48.35 48.09
CDY29751 Canola cytosol 48.35 48.09
CDY36874 Canola cytosol 48.35 48.09
CDY48224 Canola mitochondrion 51.65 45.85
CDX71216 Canola mitochondrion 51.65 44.98
CDY29231 Canola cytosol 43.41 42.7
CDY36479 Canola cytosol 43.41 42.7
CDY13039 Canola cytosol 43.41 32.24
CDY38908 Canola cytosol 35.16 31.22
CDY00519 Canola cytosol 34.62 30.58
CDY31913 Canola cytosol 34.62 30.58
CDY32591 Canola cytosol 35.16 25.3
CDY25962 Canola mitochondrion 36.81 24.19
Protein Annotations
MapMan:22.3.2.1Gene3D:3.40.50.300GO:A0A078CED8EnsemblPlants:CDX75192ProteinID:CDX75192ProteinID:CDX75192.1
GO:GO:0000166GO:GO:0003674GO:GO:0005488GO:GO:0005525GO:GO:0005575GO:GO:0005622
GO:GO:0005623EnsemblPlantsGene:GSBRNA2T00121038001InterPro:IPR024156InterPro:P-loop_NTPasePFAM:PF00025PRINTS:PR00328
PFscan:PS51417PANTHER:PTHR11711PANTHER:PTHR11711:SF182SMART:SM00177SMART:SM00178SUPFAM:SSF52540
InterPro:Small_GTP-bd_domInterPro:Small_GTPase_ARFInterPro:Small_GTPase_ARF/SARTIGRFAMs:TIGR00231UniParc:UPI0002546802SEG:seg
Description
BnaA01g05100D
Coordinates
chrLK031804:+:25577..27585
Molecular Weight (calculated)
20243.4 Da
IEP (calculated)
5.020
GRAVY (calculated)
0.017
Length
182 amino acids
Sequence
(BLAST)
001: MGIVFTKLFS SVFGNKEARI LVLGLDNAGK TTILYRLQMG EVVSTIPTIG FNVETVQYNN IKFQVWDLGG QTSIRPYWRC YFPNTQAVIY VVDSSDTDRI
101: GVAKEEFHAI LEEEELKGAM VLIFANKQDL PGALDDAAVT EALELHKIKS RQWAIFKTCA VKGEGLFEGL DWLSNTLKSG TG
Best Arabidopsis Sequence Match ( AT2G24765.1 )
(BLAST)
001: MGILFTRMFS SVFGNKEARI LVLGLDNAGK TTILYRLQMG EVVSTIPTIG FNVETVQYNN IKFQVWDLGG QTSIRPYWRC YFPNTQAVIY VVDSSDTDRI
101: GVAKEEFHAI LEEDELKGAV VLIFANKQDL PGALDDAAVT EALELHKIKS RQWAIFKTCA VKGEGLFEGL DWLSNTLKSG SG
Arabidopsis Description
ARF3ADP-ribosylation factor 3 [Source:UniProtKB/Swiss-Prot;Acc:P40940]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.