CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome

Predictor Summary:

plastid 1
mitochondrion 4
peroxisome 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47221	Canola	mitochondrion	99.45	99.45
CDY27506	Canola	cytosol	99.45	99.45
CDY37791	Canola	cytosol	99.45	99.45
CDY41444	Canola	mitochondrion	99.45	99.45
CDX91717	Canola	mitochondrion	99.45	99.45
CDX89139	Canola	cytosol	99.45	99.45
CDX80083	Canola	cytosol	99.45	99.45
CDY51415	Canola	cytosol	99.45	99.45
CDY53050	Canola	cytosol	98.89	98.89
CDY54291	Canola	mitochondrion, peroxisome	98.89	98.89
CDY25787	Canola	mitochondrion, peroxisome	98.89	98.89
CDY03747	Canola	mitochondrion, peroxisome	98.89	98.89
CDY04706	Canola	mitochondrion, peroxisome	98.89	98.89
CDY09441	Canola	mitochondrion, peroxisome	98.89	98.89
CDY11588	Canola	mitochondrion, peroxisome	98.89	98.89
CDY44152	Canola	mitochondrion, peroxisome	98.89	98.89
GSMUA_Achr5P07760_001	Banana	mitochondrion	98.34	98.34
CDY47137	Canola	peroxisome	98.34	98.34
CDX95712	Canola	cytosol	98.89	94.21
CDX83340	Canola	cytosol	98.34	93.19
CDX68343	Canola	cytosol	91.16	90.66
CDX75849	Canola	cytosol	57.46	90.43
CDX69567	Canola	mitochondrion	98.34	86.41
CDY09875	Canola	mitochondrion	98.34	83.57
CDY23500	Canola	cytosol	90.61	76.64
CDX68781	Canola	cytosol	60.22	59.89
CDX75192	Canola	cytosol	60.22	59.89
CDX76793	Canola	cytosol	59.67	59.34
CDY34756	Canola	cytosol	59.67	59.34
CDY45596	Canola	cytosol	59.67	59.34
CDY36172	Canola	cytosol	57.46	57.14
CDY48224	Canola	mitochondrion	64.64	57.07
CDX71216	Canola	mitochondrion	64.64	55.98
CDY16963	Canola	cytosol	58.56	55.21
CDX69406	Canola	cytosol	58.56	55.21
CDY43149	Canola	cytosol	58.56	55.21
CDY23463	Canola	cytosol	58.56	55.21
CDY28739	Canola	cytosol	58.56	55.21
CDY53727	Canola	cytosol	53.04	52.46
CDY36874	Canola	cytosol	52.49	51.91
CDY16265	Canola	cytosol	52.49	51.91
CDY29751	Canola	cytosol	52.49	51.91
CDY36479	Canola	cytosol	47.51	46.49
CDY29231	Canola	cytosol	47.51	46.49
CDY13039	Canola	cytosol	47.51	35.1
CDY25962	Canola	mitochondrion	53.04	34.66
CDY31913	Canola	cytosol	35.36	31.07
CDY38908	Canola	cytosol	34.81	30.73
CDY00519	Canola	cytosol	34.81	30.58
CDY32591	Canola	cytosol	34.81	24.9

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	GO:A0A078DZX3	EnsemblPlants:CDX93979	ProteinID:CDX93979	ProteinID:CDX93979.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	EnsemblPlantsGene:GSBRNA2T00156835001	InterPro:IPR024156	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328
PFscan:PS51417	PANTHER:PTHR11711	PANTHER:PTHR11711:SF182	SMART:SM00175	SMART:SM00177	SMART:SM00178
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI00000A8376

Description

BnaC04g21380D

Coordinates

chrLK031878:-:1119393..1121103

Molecular Weight (calculated)

20636.9 Da

IEP (calculated)

6.960

GRAVY (calculated)

-0.220

Length

181 amino acids

Sequence
(BLAST)

001: MGLSFGKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIANK A

Best Arabidopsis Sequence Match ( AT2G47170.3 )
(BLAST)

Arabidopsis Description

ARF1ADP-ribosylation factor 1 [Source:UniProtKB/Swiss-Prot;Acc:P36397]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.