CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032062.1-P	Field mustard	cytosol	96.7	96.7
CDY45596	Canola	cytosol	96.7	96.7
CDY34756	Canola	cytosol	96.7	96.7
AT2G24765.1	Thale cress	cytosol	96.15	96.15
CDX76793	Canola	cytosol	96.15	96.15
CDX68781	Canola	cytosol	93.96	93.96
CDX75192	Canola	cytosol	93.96	93.96
Solyc07g006640.2.1	Tomato	plastid	90.11	90.11
VIT_04s0008g07360.t01	Wine grape	cytosol, mitochondrion	89.56	90.06
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	89.56	89.56
KRH18982	Soybean	endoplasmic reticulum	84.07	88.95
KRH02913	Soybean	cytosol	80.77	88.55
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	88.46	88.46
EES14799	Sorghum	cytosol, mitochondrion	88.46	88.46
Os08t0248900-01	Rice	nucleus, plasma membrane	87.36	87.36
HORVU7Hr1G061220.1	Barley	cytosol, mitochondrion	86.81	86.81
TraesCS7D01G282400.1	Wheat	cytosol, mitochondrion	86.81	79.8
TraesCS7B01G181400.1	Wheat	cytosol, mitochondrion	86.81	79.8
TraesCS7A01G284000.3	Wheat	cytosol, mitochondrion	86.26	79.29
PGSC0003DMT400070636	Potato	cytosol, mitochondrion	85.16	61.02
CDY54291	Canola	mitochondrion, peroxisome	57.14	57.46
CDY27506	Canola	cytosol	57.14	57.46
CDY37791	Canola	cytosol	57.14	57.46
CDY53050	Canola	cytosol	57.14	57.46
CDY51415	Canola	cytosol	57.14	57.46
CDY47221	Canola	mitochondrion	57.14	57.46
CDY47137	Canola	peroxisome	57.14	57.46
CDY44152	Canola	mitochondrion, peroxisome	57.14	57.46
CDY41444	Canola	mitochondrion	57.14	57.46
CDY25787	Canola	mitochondrion, peroxisome	57.14	57.46
CDY11588	Canola	mitochondrion, peroxisome	57.14	57.46
CDY09441	Canola	mitochondrion, peroxisome	57.14	57.46
CDY04706	Canola	mitochondrion, peroxisome	57.14	57.46
CDY03747	Canola	mitochondrion, peroxisome	57.14	57.46
CDX93979	Canola	mitochondrion, peroxisome	57.14	57.46
CDX91717	Canola	mitochondrion	57.14	57.46
CDX89139	Canola	cytosol	57.14	57.46
CDX80083	Canola	cytosol	57.14	57.46
CDX68343	Canola	cytosol	56.04	56.04
CDX75849	Canola	cytosol	34.62	54.78
CDX95712	Canola	cytosol	57.14	54.74
CDX83340	Canola	cytosol	57.14	54.45
CDY28739	Canola	cytosol	54.95	52.08
CDY43149	Canola	cytosol	54.95	52.08
CDY23463	Canola	cytosol	54.4	51.56
CDX69567	Canola	mitochondrion	57.69	50.97
CDX69406	Canola	cytosol	53.3	50.52
CDY16963	Canola	cytosol	53.3	50.52
CDY09875	Canola	mitochondrion	57.69	49.3
CDY29751	Canola	cytosol	47.8	47.54
CDY53727	Canola	cytosol	47.8	47.54
CDY16265	Canola	cytosol	47.8	47.54
CDY36874	Canola	cytosol	47.25	46.99
CDY23500	Canola	cytosol	54.95	46.73
CDY48224	Canola	mitochondrion	49.45	43.9
CDX71216	Canola	mitochondrion	49.45	43.06
CDY29231	Canola	cytosol	40.66	40.0
CDY36479	Canola	cytosol	40.66	40.0
CDY13039	Canola	cytosol	40.66	30.2
CDY00519	Canola	cytosol	32.97	29.13
CDY38908	Canola	cytosol	32.42	28.78
CDY31913	Canola	cytosol	32.42	28.64
CDY32591	Canola	cytosol	32.42	23.32
CDY25962	Canola	mitochondrion	34.07	22.38

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	GO:A0A078HEF7	UniProt:A0A078HEF7	EnsemblPlants:CDY36172	ProteinID:CDY36172
ProteinID:CDY36172.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150
GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00060035001	InterPro:IPR024156	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328
PFscan:PS51417	PANTHER:PTHR11711	PANTHER:PTHR11711:SF182	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI0004EECFE2	SEG:seg

Description

BnaC04g37220DBnaC04g37220D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HEF7]

Coordinates

chrLK032368:-:161617..163683

Molecular Weight (calculated)

20301.4 Da

IEP (calculated)

5.020

GRAVY (calculated)

0.029

Length

182 amino acids

Sequence
(BLAST)

001: MGILFTRMFS SVFGNKEARI LVLGLDNAGK TTILYRLQMG EVVSTIPTIG FNVETVQYNN IKFQVWDLGS FPNKIPYWRC YFPNTQAVIY VVDSSDTDRI
101: GVAKEEFHAI LEEEELKGAV VLIFANKQDL PGALDDAAVT EALELHKIKS RQWAIFKTCA VKGEGLFEGL DWLSNTLKSG SG

Best Arabidopsis Sequence Match ( AT1G10630.1 )
(BLAST)

001: MGLSFAKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIASK A

Arabidopsis Description

ATARFA1FADP-ribosylation factor A1F [Source:UniProtKB/TrEMBL;Acc:Q6ID97]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.