CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
endoplasmic reticulum 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032015.1-P	Field mustard	cytosol	100.0	100.0
CDY43149	Canola	cytosol	100.0	100.0
CDY23463	Canola	cytosol	97.4	97.4
AT3G03120.1	Thale cress	cytosol	95.83	95.83
CDY16963	Canola	cytosol	94.27	94.27
CDX69406	Canola	cytosol	94.27	94.27
Solyc06g072800.2.1	Tomato	cytosol	64.58	93.94
Solyc03g096910.2.1	Tomato	cytosol	63.54	92.42
KRH27742	Soybean	cytosol	90.1	89.64
VIT_16s0039g02240.t01	Wine grape	cytosol	90.1	89.64
KRH77702	Soybean	cytosol	81.77	89.2
PGSC0003DMT400069538	Potato	cytosol	89.58	89.12
PGSC0003DMT400001454	Potato	cytosol	89.58	89.12
KRH29023	Soybean	cytosol	89.58	88.21
KRH24049	Soybean	cytosol	89.06	87.69
TraesCS6A01G268000.1	Wheat	cytosol	86.98	87.43
TraesCS6D01G246900.1	Wheat	cytosol	86.46	86.91
EES07411	Sorghum	cytosol	86.46	85.57
Zm00001d051546_P001	Maize	cytosol	85.42	84.54
GSMUA_AchrUn_...	Banana	cytosol	79.69	82.26
GSMUA_Achr7P04780_001	Banana	cytosol	80.21	81.91
Os02t0699300-01	Rice	cytosol, extracellular, plastid	48.96	75.81
Zm00001d017717_P001	Maize	cytosol	86.46	75.11
HORVU6Hr1G067840.2	Barley	cytosol	86.98	59.86
CDX89139	Canola	cytosol	55.21	58.56
CDY54291	Canola	mitochondrion, peroxisome	55.21	58.56
CDY53050	Canola	cytosol	55.21	58.56
CDY51415	Canola	cytosol	55.21	58.56
CDY47221	Canola	mitochondrion	55.21	58.56
CDY47137	Canola	peroxisome	55.21	58.56
CDY44152	Canola	mitochondrion, peroxisome	55.21	58.56
CDY41444	Canola	mitochondrion	55.21	58.56
CDY37791	Canola	cytosol	55.21	58.56
CDX93979	Canola	mitochondrion, peroxisome	55.21	58.56
CDX91717	Canola	mitochondrion	55.21	58.56
CDX80083	Canola	cytosol	55.21	58.56
CDY27506	Canola	cytosol	55.21	58.56
CDY25787	Canola	mitochondrion, peroxisome	55.21	58.56
CDY03747	Canola	mitochondrion, peroxisome	55.21	58.56
CDY04706	Canola	mitochondrion, peroxisome	55.21	58.56
CDY11588	Canola	mitochondrion, peroxisome	55.21	58.56
CDY09441	Canola	mitochondrion, peroxisome	55.21	58.56
TraesCS6B01G295200.1	Wheat	plastid	75.0	58.54
CDX75192	Canola	cytosol	54.17	57.14
CDX68781	Canola	cytosol	54.17	57.14
CDX95712	Canola	cytosol	56.25	56.84
CDY34756	Canola	cytosol	53.65	56.59
CDY45596	Canola	cytosol	53.65	56.59
CDX83340	Canola	cytosol	56.25	56.54
CDX68343	Canola	cytosol	53.12	56.04
CDX76793	Canola	cytosol	53.12	56.04
CDY36172	Canola	cytosol	52.08	54.95
CDX75849	Canola	cytosol	32.81	54.78
CDX69567	Canola	mitochondrion	55.21	51.46
CDY09875	Canola	mitochondrion	55.21	49.77
CDY23500	Canola	cytosol	54.17	48.6
CDY48224	Canola	mitochondrion	51.04	47.8
CDY29751	Canola	cytosol	45.31	47.54
CDY16265	Canola	cytosol	45.31	47.54
CDY36874	Canola	cytosol	44.79	46.99
CDY53727	Canola	cytosol	44.79	46.99
CDX71216	Canola	mitochondrion	51.04	46.89
CDY36479	Canola	cytosol	39.58	41.08
CDY29231	Canola	cytosol	39.58	41.08
CDY13039	Canola	cytosol	39.58	31.02
CDY31913	Canola	cytosol	30.73	28.64
CDY00519	Canola	cytosol	30.73	28.64
CDY38908	Canola	cytosol	30.21	28.29
CDY25962	Canola	mitochondrion	33.33	23.1
CDY32591	Canola	cytosol	30.21	22.92

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	GO:A0A078I0S4	UniProt:A0A078I0S4	EnsemblPlants:CDY28739	ProteinID:CDY28739
ProteinID:CDY28739.1	ProteinID:CDY43149.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264
GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00041377001	InterPro:IPR024156	InterPro:P-loop_NTPase	PFAM:PF00025
PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711	PANTHER:PTHR11711:SF300	SMART:SM00177	SMART:SM00178
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI000254615E

Description

BnaCnng06250DBnaA05g32370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I0S4]

Coordinates

chrLK032225:+:493879..495697

Molecular Weight (calculated)

21774.5 Da

IEP (calculated)

8.207

GRAVY (calculated)

-0.134

Length

192 amino acids

Sequence
(BLAST)

001: MGQTFRKLFD TFFGNQEMRV VMLGLDAAGK TTILYKLHIG EVLSTVPTIG FNVEKVQYKN VMFTVWDVGG QEKLRPLWRH YFNNTDGLIY VVDSLDRERI
101: GKAKQEFQEI IKDPFMLNSV ILVFANKQDM RGAMSPREVC EGLGLLDLKN RKWHIQGTCA LQGDGLYEGL DWLSSTLKEV RAAGFSSAGP LF

Best Arabidopsis Sequence Match ( AT3G03120.1 )
(BLAST)

001: MGQTFRKLFD TFFGNQEMRV VMLGLDAAGK TTILYKLHIG EVLSTVPTIG FNVEKVQYKN VIFTVWDVGG QEKLRPLWRH YFNNTDGLIY VVDSLDRERI
101: GKAKQEFQDI IRDPFMLNSV ILVFANKQDM RGAMSPREVC EGLGLLDLKN RKWHIQGTCA LQGDGLYEGL DWLSATLKEV KAAGYSSVGP SF

Arabidopsis Description

ATARFB1CATARFB1C [Source:UniProtKB/TrEMBL;Acc:A0A178VH47]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.