Factsheet for GSMUA_AchrUn_randomP07790_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
endoplasmic reticulum 1
golgi 1
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P04780_001	Banana	cytosol	93.01	92.02
Solyc06g072800.2.1	Tomato	cytosol	63.98	90.15
Solyc03g096910.2.1	Tomato	cytosol	63.98	90.15
GSMUA_Achr5P03700_001	Banana	cytosol	87.1	83.51
TraesCS6A01G268000.1	Wheat	cytosol	84.95	82.72
TraesCS6D01G246900.1	Wheat	cytosol	84.41	82.2
EES07411	Sorghum	cytosol	85.48	81.96
VIT_16s0039g02240.t01	Wine grape	cytosol	84.95	81.87
Zm00001d051546_P001	Maize	cytosol	84.95	81.44
GSMUA_Achr4P27450_001	Banana	cytosol	84.95	81.44
PGSC0003DMT400069538	Potato	cytosol	84.41	81.35
PGSC0003DMT400001454	Potato	cytosol	84.41	81.35
KRH27742	Soybean	cytosol	83.87	80.83
KRH77702	Soybean	cytosol	76.34	80.68
AT5G17060.2	Thale cress	cytosol	82.8	80.21
AT3G03120.1	Thale cress	cytosol	82.8	80.21
KRH29023	Soybean	cytosol	83.87	80.0
CDY43149	Canola	cytosol	82.26	79.69
Bra032015.1-P	Field mustard	cytosol	82.26	79.69
CDY28739	Canola	cytosol	82.26	79.69
KRH24049	Soybean	cytosol	83.33	79.49
CDX69406	Canola	cytosol	81.72	79.17
CDY16963	Canola	cytosol	81.72	79.17
CDY23463	Canola	cytosol	81.18	78.65
Bra021371.1-P	Field mustard	cytosol	81.18	78.65
Bra008579.1-P	Field mustard	cytosol	81.18	78.65
Os02t0699300-01	Rice	cytosol, extracellular, plastid	48.92	73.39
Zm00001d017717_P001	Maize	cytosol	84.95	71.49
GSMUA_Achr6P32180_001	Banana	cytosol	44.09	60.29
GSMUA_Achr10P...	Banana	cytosol	51.08	59.38
GSMUA_Achr9P05130_001	Banana	mitochondrion	57.53	59.12
GSMUA_Achr9P17120_001	Banana	cytosol	50.54	58.75
GSMUA_Achr3P09430_001	Banana	cytosol	50.54	58.75
GSMUA_Achr5P07760_001	Banana	mitochondrion	56.99	58.56
GSMUA_Achr2P11590_001	Banana	mitochondrion	56.45	58.01
GSMUA_Achr4P10250_001	Banana	mitochondrion	56.45	58.01
GSMUA_Achr4P02310_001	Banana	mitochondrion	55.91	57.46
GSMUA_Achr7P18350_001	Banana	cytosol	51.08	57.23
GSMUA_Achr10P...	Banana	cytosol	51.08	57.23
HORVU6Hr1G067840.2	Barley	cytosol	85.48	56.99
TraesCS6B01G295200.1	Wheat	plastid	73.12	55.28
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	53.76	54.95
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	52.15	53.3
GSMUA_Achr11P...	Banana	cytosol	56.99	53.0
GSMUA_Achr4P01270_001	Banana	endoplasmic reticulum	46.24	46.99
GSMUA_Achr1P04710_001	Banana	endoplasmic reticulum, extracellular	45.7	46.45
GSMUA_Achr3P18390_001	Banana	plasma membrane	56.99	43.8
GSMUA_Achr9P26270_001	Banana	cytosol	37.63	37.84
GSMUA_Achr6P08570_001	Banana	cytosol	56.45	32.71
GSMUA_Achr5P00190_001	Banana	extracellular	31.72	29.06
GSMUA_Achr11P...	Banana	endoplasmic reticulum	29.57	27.09

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264
GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:GSMUA_AchrUn_randomG07790_001	EnsemblPlants:GSMUA_AchrUn_randomP07790_001	EnsemblPlants:GSMUA_AchrUn_randomT07790_001	InterPro:IPR024156
UniProt:M0U790	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711
PANTHER:PTHR11711:SF300	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF
InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI000294FA55	:	:	:

Description

ADP-ribosylation factor [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG07790_001]

Coordinates

chrchrUn_random:-:32684428..32689556

Molecular Weight (calculated)

21202.8 Da

IEP (calculated)

6.518

GRAVY (calculated)

-0.060

Length

186 amino acids

Sequence
(BLAST)

001: MGQAFRKLFD RFFGPVEMRV AMLGLDAAGK TTILYKLHIG EVLSTVPTIG FNVEKVQYKN VVFTVWDVGG QEKLRPLWRH YFCNTDALIY VVDSLDRERI
101: GNAKEEFQAI IRDPFMLNSI ILVFANKQDL RGVMTPMEIS EGLGLYDLRN RTWHVQGTCA LTGDGLYEGL DWLVTALKEL QDSGRH

Best Arabidopsis Sequence Match ( AT5G17060.2 )
(BLAST)

001: MGQAFRKLFD TFFGNQEMRV VMLGLDAAGK TTILYKLHIG EVLSTVPTIG FNVEKVQYKN VMFTVWDVGG QEKLRPLWRH YFNNTDGLIY VVDSLDRERI
101: GKAKQEFQEI IKDPFMLNSI ILVFANKQDM RGAMSPREVC EGLGLFDLKN RKWHIQGTCA LRGDGLYEGL DWLSSTLKDV KAAGFTSVGH SF

Arabidopsis Description

ATARFB1BADP-ribosylation factor B1B [Source:UniProtKB/TrEMBL;Acc:Q9LFJ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.