Factsheet for GSMUA_Achr3P09430_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 3
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P17120_001	Banana	cytosol	98.75	98.75
GSMUA_Achr10P...	Banana	cytosol	98.12	98.12
GSMUA_Achr6P32180_001	Banana	cytosol	81.25	95.59
GSMUA_Achr7P18350_001	Banana	cytosol	97.5	93.98
GSMUA_Achr10P...	Banana	cytosol	96.88	93.37
GSMUA_Achr5P07760_001	Banana	mitochondrion	98.75	87.29
GSMUA_Achr2P11590_001	Banana	mitochondrion	98.12	86.74
GSMUA_Achr4P10250_001	Banana	mitochondrion	98.12	86.74
GSMUA_Achr9P05130_001	Banana	mitochondrion	97.5	86.19
GSMUA_Achr4P02310_001	Banana	mitochondrion	96.88	85.64
GSMUA_Achr11P...	Banana	cytosol	96.88	77.5
GSMUA_Achr3P18390_001	Banana	plasma membrane	96.88	64.05
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	61.88	54.4
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	61.25	53.85
GSMUA_Achr7P04780_001	Banana	cytosol	60.0	51.06
GSMUA_AchrUn_...	Banana	cytosol	58.75	50.54
GSMUA_Achr5P03700_001	Banana	cytosol	60.62	50.0
GSMUA_Achr1P04710_001	Banana	endoplasmic reticulum, extracellular	56.88	49.73
GSMUA_Achr4P27450_001	Banana	cytosol	59.38	48.97
GSMUA_Achr4P01270_001	Banana	endoplasmic reticulum	55.62	48.63
GSMUA_Achr6P08570_001	Banana	cytosol	97.5	48.6
GSMUA_Achr9P26270_001	Banana	cytosol	46.88	40.54
GSMUA_Achr5P00190_001	Banana	extracellular	35.0	27.59
GSMUA_Achr11P...	Banana	endoplasmic reticulum	33.75	26.6

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264
GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr3G09430_001	EnsemblPlants:GSMUA_Achr3P09430_001	EnsemblPlants:GSMUA_Achr3T09430_001	InterPro:IPR024156
UniProt:M0SD60	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711
PANTHER:PTHR11711:SF182	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF
InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI0002948B26	:	:	:

Description

ADP-ribosylation factor 2 [Source:GMGC_GENE;Acc:GSMUA_Achr3G09430_001]

Coordinates

chr3:+:6806593..6810765

Molecular Weight (calculated)

18195.7 Da

IEP (calculated)

5.244

GRAVY (calculated)

-0.292

Length

160 amino acids

Sequence
(BLAST)

001: MVGLDAAGKT TILYKLKLGE IVTTIPTIGF NVETVEYKNI SFTVWDVGGQ DKIRPLWRHY FQNTQGLIFV VDSNDRDRVI EARDELHRML NEDELRDAVL
101: LVFANKQDLP NAMNAAEITD KLGLHSLRQR HWYIQSTCAT SGEGLYEGLD WLSNNIANKA

Best Arabidopsis Sequence Match ( AT1G10630.1 )
(BLAST)

001: MGLSFAKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIASK A

Arabidopsis Description

ATARFA1FADP-ribosylation factor A1F [Source:UniProtKB/TrEMBL;Acc:Q6ID97]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.