Factsheet for GSMUA_Achr4P10250_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 5
peroxisome 1
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	88.4	100.0
GSMUA_Achr9P17120_001	Banana	cytosol	86.74	98.12
GSMUA_Achr3P09430_001	Banana	cytosol	86.74	98.12
GSMUA_Achr6P32180_001	Banana	cytosol	73.48	97.79
GSMUA_Achr4P02310_001	Banana	mitochondrion	97.79	97.79
GSMUA_Achr9P05130_001	Banana	mitochondrion	97.24	97.24
GSMUA_Achr2P11590_001	Banana	mitochondrion	96.69	96.69
Zm00001d008295_P002	Maize	plastid	96.13	96.13
GSMUA_Achr5P07760_001	Banana	mitochondrion	95.58	95.58
GSMUA_Achr10P...	Banana	cytosol	86.19	93.98
TraesCS5B01G140900.1	Wheat	cytosol	93.92	93.92
TraesCS5A01G142100.1	Wheat	cytosol	93.92	93.92
GSMUA_Achr7P18350_001	Banana	cytosol	85.64	93.37
TraesCS5D01G150000.1	Wheat	cytosol	93.92	92.9
GSMUA_Achr11P...	Banana	cytosol	95.58	86.5
GSMUA_Achr3P18390_001	Banana	plasma membrane	95.58	71.49
HORVU5Hr1G045440.2	Barley	cytosol, plastid	93.92	67.46
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	62.43	62.09
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	61.88	61.54
GSMUA_Achr7P04780_001	Banana	cytosol	59.67	57.45
GSMUA_AchrUn_...	Banana	cytosol	58.01	56.45
GSMUA_Achr5P03700_001	Banana	cytosol	59.67	55.67
GSMUA_Achr4P27450_001	Banana	cytosol	58.56	54.64
GSMUA_Achr6P08570_001	Banana	cytosol	95.03	53.58
GSMUA_Achr1P04710_001	Banana	endoplasmic reticulum, extracellular	54.14	53.55
GSMUA_Achr4P01270_001	Banana	endoplasmic reticulum	53.59	53.01
GSMUA_Achr9P26270_001	Banana	cytosol	46.41	45.41
GSMUA_Achr5P00190_001	Banana	extracellular	35.91	32.02
GSMUA_Achr11P...	Banana	endoplasmic reticulum	34.25	30.54

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264
GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr4G10250_001	EnsemblPlants:GSMUA_Achr4P10250_001	EnsemblPlants:GSMUA_Achr4T10250_001	InterPro:IPR024156
UniProt:M0SMP2	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711
PANTHER:PTHR11711:SF182	SMART:SM00175	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI000295DE9B	:	:

Description

ADP-ribosylation factor 1 [Source:GMGC_GENE;Acc:GSMUA_Achr4G10250_001]

Coordinates

chr4:+:7451096..7454817

Molecular Weight (calculated)

20768.0 Da

IEP (calculated)

6.960

GRAVY (calculated)

-0.208

Length

181 amino acids

Sequence
(BLAST)

001: MGLTFTRLFS RLFSKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRI
101: IEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIVSK A

Best Arabidopsis Sequence Match ( AT5G14670.3 )
(BLAST)

001: MGLNFTKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIATK A

Arabidopsis Description

ATARFA1BADP-ribosylation factor A1B [Source:UniProtKB/TrEMBL;Acc:Q9LYJ3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.