Factsheet for HORVU5Hr1G045440.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G140900.1	Wheat	cytosol	71.83	100.0
TraesCS5A01G142100.1	Wheat	cytosol	71.83	100.0
TraesCS5D01G150000.1	Wheat	cytosol	71.43	98.36
GSMUA_Achr10P...	Banana	cytosol	61.51	96.88
GSMUA_Achr4P02310_001	Banana	mitochondrion	67.46	93.92
GSMUA_Achr4P10250_001	Banana	mitochondrion	67.46	93.92
Zm00001d008295_P002	Maize	plastid	66.27	92.27
HORVU1Hr1G068790.1	Barley	plastid	70.24	75.0
HORVU5Hr1G111500.2	Barley	mitochondrion	66.67	71.79
HORVU0Hr1G027130.1	Barley	plasma membrane	70.24	69.69
HORVU2Hr1G054780.5	Barley	cytosol	41.67	61.4
HORVU7Hr1G061220.1	Barley	cytosol, mitochondrion	42.86	59.34
HORVU1Hr1G051350.1	Barley	cytosol	43.65	57.59
HORVU3Hr1G079700.1	Barley	cytosol	71.03	57.56
HORVU4Hr1G038090.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	37.7	51.63
HORVU6Hr1G016100.1	Barley	cytosol, mitochondrion	38.89	48.51
HORVU6Hr1G067840.2	Barley	cytosol	46.03	41.58
HORVU5Hr1G004340.2	Barley	cytosol, plastid	34.52	36.55
HORVU5Hr1G002120.6	Barley	cytosol, plastid	34.13	33.86
HORVU1Hr1G014610.1	Barley	cytosol	25.4	31.53

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	UniProt:A0A287R0T3	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0016020	GO:GO:0016021
EnsemblPlantsGene:HORVU5Hr1G045440	EnsemblPlants:HORVU5Hr1G045440.2	InterPro:IPR024156	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328
PFscan:PS51417	PANTHER:PTHR11711	PANTHER:PTHR11711:SF182	SMART:SM00175	SMART:SM00177	SMART:SM00178
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	TMHMM:TMhelix
UniParc:UPI000B4769D5	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:351866577..351869198

Molecular Weight (calculated)

28448.2 Da

IEP (calculated)

10.977

GRAVY (calculated)

-0.529

Length

252 amino acids

Sequence
(BLAST)

001: VPQTHHGGSP LTSRLHAGPT RRQPKRIPPP RVGRTLSSSS PKATLGDSTR GEKRRREGRR RRWRRSLVGR SMGLSFGTLF GALFAKKEMR ILMVGLDAAG
101: KTTILYKLKL GEIVTTIPTI GFNVETVEYK NISFTVWDVG GQDKIRPLWR HYFQNTQGLI FVVDSNDRDR IAEARDELHR MLNEDELRNA VLLVFANKQD
201: LPNAMNAAEI TDKLGLHSLR QRHWYIQSAC ATSGEGLYEG LDWLSNNIAS KS

Best Arabidopsis Sequence Match ( AT2G47170.1 )
(BLAST)

001: MGLSFGKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIASK A

Arabidopsis Description

ARF1ADP-ribosylation factor 1 [Source:UniProtKB/Swiss-Prot;Acc:P36397]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.