Factsheet for VIT_11s0052g01720.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 4
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH18982	Soybean	endoplasmic reticulum	73.42	94.77
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	75.68	92.31
VIT_04s0008g07360.t01	Wine grape	cytosol, mitochondrion	75.23	92.27
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	74.77	91.21
KRH02913	Soybean	cytosol	68.02	90.96
Solyc07g006640.2.1	Tomato	plastid	73.87	90.11
Os08t0248900-01	Rice	nucleus, plasma membrane	73.42	89.56
EES14799	Sorghum	cytosol, mitochondrion	73.42	89.56
HORVU7Hr1G061220.1	Barley	cytosol, mitochondrion	72.97	89.01
TraesCS7D01G282400.1	Wheat	cytosol, mitochondrion	72.52	81.31
TraesCS7B01G181400.1	Wheat	cytosol, mitochondrion	72.52	81.31
TraesCS7A01G284000.3	Wheat	cytosol, mitochondrion	72.07	80.81
PGSC0003DMT400070636	Potato	cytosol, mitochondrion	72.97	63.78
VIT_14s0066g01080.t01	Wine grape	mitochondrion	47.3	58.01
VIT_05s0020g00490.t01	Wine grape	cytosol	48.2	57.84
VIT_01s0127g00440.t01	Wine grape	cytosol, mitochondrion	48.65	55.1
VIT_16s0039g02240.t01	Wine grape	cytosol	46.4	53.37
VIT_07s0129g01090.t01	Wine grape	mitochondrion	41.89	46.97
VIT_05s0020g04460.t01	Wine grape	cytosol	23.42	43.33
VIT_04s0023g01820.t01	Wine grape	cytosol	35.59	42.7
VIT_07s0005g02000.t01	Wine grape	cytosol	48.2	39.05
VIT_00s0215g00070.t01	Wine grape	endoplasmic reticulum	29.28	31.71
VIT_14s0060g00690.t01	Wine grape	golgi	48.2	31.1
VIT_00s2604g00010.t01	Wine grape	extracellular	13.96	31.0
VIT_19s0027g00160.t01	Wine grape	cytosol, extracellular	18.02	30.53
VIT_00s0189g00080.t01	Wine grape	cytosol	15.77	23.49

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	ProteinID:CCB44594	ProteinID:CCB44594.1	UniProt:F6GXA8	EMBL:FN594964
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987
InterPro:IPR024156	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711
PANTHER:PTHR11711:SF41	SMART:SM00175	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI000210868A	ArrayExpress:VIT_11s0052g01720	EnsemblPlantsGene:VIT_11s0052g01720
EnsemblPlants:VIT_11s0052g01720.t01	:	:	:	:	:

Description

No Description!

Coordinates

chr11:+:19509449..19534221

Molecular Weight (calculated)

24905.0 Da

IEP (calculated)

4.728

GRAVY (calculated)

0.085

Length

222 amino acids

Sequence
(BLAST)

001: MGILFTRMFS SLFGNREARI LVLGLDNAGK TTILYRLQMG EVVSTIPTIG FNVETVQYNN IKFQVWDLGG QTSIRPYWRC YFPNTQAIIY VVDSSDTDRL
101: VIAKDEFHAI LQEEELKGAV VLIFANKQDL PGALDDAAVT EALELHKIKN RQWAIFKTSA IKGEGLFEGL DCLAYSGMLL PWPTIFLNYN KEFSAFEALG
201: QGSTMQLCSP TYTMSSLEFN AV

Best Arabidopsis Sequence Match ( AT2G24765.1 )
(BLAST)

001: MGILFTRMFS SVFGNKEARI LVLGLDNAGK TTILYRLQMG EVVSTIPTIG FNVETVQYNN IKFQVWDLGG QTSIRPYWRC YFPNTQAVIY VVDSSDTDRI
101: GVAKEEFHAI LEEDELKGAV VLIFANKQDL PGALDDAAVT EALELHKIKS RQWAIFKTCA VKGEGLFEGL DWLSNTLKSG SG

Arabidopsis Description

ARF3ADP-ribosylation factor 3 [Source:UniProtKB/Swiss-Prot;Acc:P40940]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.