Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 6
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G10630.2 | Thale cress | mitochondrion | 94.15 | 97.79 |
| AT1G23490.1 | Thale cress | mitochondrion, peroxisome | 94.15 | 97.79 |
| AT1G70490.4 | Thale cress | mitochondrion, peroxisome | 94.15 | 97.79 |
| AT2G47170.2 | Thale cress | mitochondrion | 94.15 | 97.79 |
| AT3G62290.1 | Thale cress | cytosol | 93.62 | 97.24 |
| Bra016215.1-P | Field mustard | cytosol | 92.02 | 95.58 |
| CDX75849 | Canola | cytosol | 54.26 | 88.7 |
| TraesCS5B01G479100.1 | Wheat | golgi | 93.62 | 83.41 |
| HORVU5Hr1G111500.2 | Barley | mitochondrion | 93.62 | 75.21 |
| AT2G24765.1 | Thale cress | cytosol | 58.51 | 60.44 |
| AT2G15310.1 | Thale cress | mitochondrion | 64.36 | 59.02 |
| AT3G03120.1 | Thale cress | cytosol | 56.38 | 55.21 |
| AT5G17060.2 | Thale cress | cytosol | 55.85 | 54.69 |
| AT3G22950.1 | Thale cress | cytosol | 51.06 | 52.46 |
| AT2G18390.1 | Thale cress | cytosol | 45.21 | 45.95 |
| AT5G52210.2 | Thale cress | cytosol | 32.98 | 30.24 |
Protein Annotations
| MapMan:22.3.2.1 | Gene3D:3.40.50.300 | EntrezGene:831319 | ProteinID:AED92061.1 | ArrayExpress:AT5G14670 | EnsemblPlantsGene:AT5G14670 |
| RefSeq:AT5G14670 | TAIR:AT5G14670 | RefSeq:AT5G14670-TAIR-G | EnsemblPlants:AT5G14670.1 | TAIR:AT5G14670.1 | Symbol:ATARFA1B |
| Unigene:At.54845 | ProteinID:CAB87634.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0007264 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016004 | GO:GO:0030234 |
| GO:GO:0043085 | InterPro:IPR024156 | RefSeq:NP_001318560.1 | InterPro:P-loop_NTPase | PFAM:PF00025 | PO:PO:0000005 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009030 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00328 | PFscan:PS51417 |
| PANTHER:PTHR11711 | PANTHER:PTHR11711:SF182 | UniProt:Q9LYJ3 | SMART:SM00175 | SMART:SM00177 | SMART:SM00178 |
| SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase_ARF | InterPro:Small_GTPase_ARF/SAR | TIGRFAMs:TIGR00231 | UniParc:UPI00000A94EC |
Description
ATARFA1BADP-ribosylation factor A1B [Source:UniProtKB/TrEMBL;Acc:Q9LYJ3]
Coordinates
chr5:+:4729068..4730495
Molecular Weight (calculated)
21536.0 Da
IEP (calculated)
6.960
GRAVY (calculated)
-0.206
Length
188 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLNFTKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIATK VNNLNIPF
101: VEARDELHRM LNEDELRDAV LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TSGEGLYEGL DWLSNNIATK VNNLNIPF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.