Factsheet for AT2G15310.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48224	Canola	mitochondrion	89.76	89.76
CDX71216	Canola	mitochondrion	89.27	87.56
PGSC0003DMT400075807	Potato	cytosol	59.51	67.4
PGSC0003DMT400064241	Potato	cytosol	59.51	67.4
PGSC0003DMT400064240	Potato	cytosol	55.61	67.06
AT1G23490.1	Thale cress	mitochondrion, peroxisome	59.02	66.85
AT1G70490.4	Thale cress	mitochondrion, peroxisome	59.02	66.85
AT2G47170.2	Thale cress	mitochondrion	59.02	66.85
AT3G62290.1	Thale cress	cytosol	59.02	66.85
AT1G10630.2	Thale cress	mitochondrion	59.02	66.85
AT5G14670.1	Thale cress	mitochondrion	59.02	64.36
Solyc02g092970.2.1	Tomato	cytosol	58.54	62.83
AT3G03120.1	Thale cress	cytosol	49.76	53.12
AT2G24765.1	Thale cress	cytosol	46.83	52.75
AT5G17060.2	Thale cress	cytosol	49.27	52.6
OQU85607	Sorghum	cytosol, mitochondrion	44.88	51.4
Zm00001d017650_P002	Maize	cytosol	43.41	50.0
AT3G22950.1	Thale cress	cytosol	40.49	45.36
Bra036410.1-P	Field mustard	mitochondrion	89.27	43.57
AT2G18390.1	Thale cress	cytosol	38.54	42.7
AT5G52210.2	Thale cress	cytosol	27.8	27.8

Protein Annotations

MapMan:22.3.2.1	Gene3D:3.40.50.300	EntrezGene:816020	ProteinID:AAD26902.1	ProteinID:AEC06385.1	ArrayExpress:AT2G15310
EnsemblPlantsGene:AT2G15310	RefSeq:AT2G15310	TAIR:AT2G15310	RefSeq:AT2G15310-TAIR-G	EnsemblPlants:AT2G15310.1	TAIR:AT2G15310.1
Symbol:ATARFB1A	EMBL:AY054470	EMBL:AY093273	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0006810	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987
GO:GO:0015031	GO:GO:0016192	InterPro:IPR024156	RefSeq:NP_179133.1	InterPro:P-loop_NTPase	PFAM:PF00025
PO:PO:0000013	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0007103	PO:PO:0007115
PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0009005	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009046	PO:PO:0009047	PO:PO:0020030	PO:PO:0020100
PO:PO:0025022	PO:PO:0025281	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711	PANTHER:PTHR11711:SF297
UniProt:Q9SHU5	SMART:SM00175	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI0000000E1E	SEG:seg	:

Description

ATARFB1AProbable ADP-ribosylation factor At2g15310 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHU5]

Coordinates

chr2:+:6653663..6655501

Molecular Weight (calculated)

23081.8 Da

IEP (calculated)

10.181

GRAVY (calculated)

-0.293

Length

205 amino acids

Sequence
(BLAST)

001: MGARFSRIAK RFLPKSKVRI LMVGLDGSGK TTILYKLKLG EVVTTVPTIG FNLETVEYKG INFTVWDIGG QEKIRKLWRH YFQNAQGLIF VVDSSDSERL
101: SEARNELHRI LTDNELEGAC VLVFANKQDS RNALPVAEVA NKLGLHSLSK RCWLIQGTSA ISGQGLYEGL EWLSTTIPNK PERSTSVSSF RSDSYERKLV
201: RGPRY

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.