Factsheet for HORVU2Hr1G059110.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU7Hr1G061220.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G66030.1	HORVU7Hr1G061220.1	AT2G24765.1	16236155
AT5G66030.1	HORVU7Hr1G061220.1	AT2G24765.1	16830178

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH28898	Soybean	cytosol	62.88	63.36
GSMUA_AchrUn_...	Banana	cytosol	30.3	27.59
HORVU2Hr1G059170.7	Barley	mitochondrion	98.48	16.03
TraesCS2A01G234700.2	Wheat	cytosol, mitochondrion, nucleus, plastid	94.7	15.41
TraesCS2B01G259500.1	Wheat	mitochondrion	94.7	15.41
TraesCS2D01G238300.1	Wheat	mitochondrion	93.94	15.29
KXG36201	Sorghum	cytosol	85.61	14.6
Os07t0472500-01	Rice	nucleus	87.12	14.47
VIT_04s0210g00200.t01	Wine grape	cytosol	71.97	11.9
KRH76555	Soybean	cytosol	71.21	11.85
Zm00001d006357_P001	Maize	cytosol	69.7	11.84
Solyc02g082840.2.1	Tomato	nucleus	71.21	11.84
AT5G66030.1	Thale cress	nucleus	70.45	11.8
KRH28897	Soybean	cytosol	10.61	2.12

Protein Annotations

EnsemblPlants:HORVU2Hr1G059110.2	EnsemblPlantsGene:HORVU2Hr1G059110	InterPro:GRIP_dom	InterPro:IPR000237	ncoils:Coil	PANTHER:PTHR23157
PFAM:PF01465	PFscan:PS50913	SEG:seg	SMART:SM00755	UniParc:UPI000B46817E	UniProt:A0A287I3Y1
MapMan:22.6.7.1	:	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:391045315..391058277

Molecular Weight (calculated)

15051.0 Da

IEP (calculated)

4.512

GRAVY (calculated)

-0.577

Length

132 amino acids

Sequence
(BLAST)

001: VSNSDNQSPG YVKQDALSIE LAEQQILLLA RQQAQREEEL GQSERHILAL QQEIEDLERE NRLHDQQEAM SKAELRNMER SQKREGIDMT YLKNVILKLL
101: ETGEVGALLP VVAMLLQFSP DELNKCQHGV LS

Best Arabidopsis Sequence Match ( AT5G66030.1 )
(BLAST)

001: MSEDKESDVV GEEEESHVIK EDKELNDASN ETLTENGDQL LQMIAELRLE NDFLRSQFEG LKDEVAQGRS LQKAEQVEAD SAQLKQLQEQ VASLSREIDV
101: EKQTRVAAEQ ALEHLREAYS EADAKSQEYS SKFSQVEQKL DQEIKERDEK YADLDAKFTR LHKRAKQRIQ EIQKEKDDLD ARFREVNETA ERASSQHSSM
201: QQELERTRQQ ANEALKAMDA ERQQLRSANN KLRDTIEELR GSLQPKENKI ETLQQSLLDK DQILEDLKKQ LQAVEERKQI AVTELSAKHQ KNLEGLEAQV
301: VDALSERDKA AETISSLQVL LAEKESKIAE MEAAATGEAA RLRAAAETLK GELAHLKSEN EKEKETWEAS CDALKSKLEI AESNYLQAEI EVAKMRSQLG
401: SEMSMQTQIL STKDAELKGA REEINRLQSE FSSYKIRAHA LLQKKDMELA AAKDSEQIKS LEEALKEAEK EVYLVSAERD RAQQDLQSAL ASLEKELEER
501: AGALKDASEQ IKSLEVKLDS TVARNQAEKQ AWEEDLRVLE ETWRRRCEAL TAQNEASPAE GIEKELENAK LRNKRMKEEH ESVRELADRL IEEKDREISR
601: LVDEMTNLRK SMESKPVWNK SPSQVHHYGN NNTESQQQDV SNLSTSAAEH QILILARQQA QREEELAQTQ RHILALQEEI EELERENRLH SQQEAVLKTE
701: LREMERKQKR EGVDMTYLKN VILKLLETGE VEALLPVVGM LLQFSPEEIQ KCQQAYHSST TAATTTEATP SPASEGSGLS VFSRFSFS

Arabidopsis Description

GRIPProtein GRIP [Source:UniProtKB/Swiss-Prot;Acc:Q8S2T0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.