Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU7Hr1G061220.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G66030.1 | HORVU7Hr1G061220.1 | AT2G24765.1 | 16236155 |
| AT5G66030.1 | HORVU7Hr1G061220.1 | AT2G24765.1 | 16830178 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G059110.2 | Barley | cytosol | 16.03 | 98.48 |
| TraesCS2B01G259500.1 | Wheat | mitochondrion | 93.34 | 93.34 |
| TraesCS2D01G238300.1 | Wheat | mitochondrion | 93.22 | 93.22 |
| TraesCS2A01G234700.2 | Wheat | cytosol, mitochondrion, nucleus, plastid | 93.09 | 93.09 |
| KXG36201 | Sorghum | cytosol | 70.78 | 74.16 |
| Os07t0472500-01 | Rice | nucleus | 71.89 | 73.33 |
| KRH28898 | Soybean | cytosol | 11.59 | 71.76 |
| Zm00001d006357_P001 | Maize | cytosol | 64.24 | 67.05 |
| VIT_04s0210g00200.t01 | Wine grape | cytosol | 52.28 | 53.13 |
| KRH76555 | Soybean | cytosol | 50.68 | 51.83 |
| Solyc02g082840.2.1 | Tomato | nucleus | 49.81 | 50.88 |
| AT5G66030.1 | Thale cress | nucleus | 46.86 | 48.22 |
| KRH28897 | Soybean | cytosol | 38.59 | 47.42 |
| GSMUA_AchrUn_... | Banana | cytosol | 6.54 | 36.55 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G059170.7 | EnsemblPlantsGene:HORVU2Hr1G059170 | InterPro:GRIP_dom | InterPro:IPR000237 | ncoils:Coil | PANTHER:PTHR23160 |
| PFAM:PF01465 | PFscan:PS50913 | SEG:seg | SMART:SM00755 | UniParc:UPI000B47BF4B | UniProt:A0A287I449 |
| MapMan:22.6.7.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:391245099..391300772
Molecular Weight (calculated)
92252.7 Da
IEP (calculated)
4.676
GRAVY (calculated)
-0.894
Length
811 amino acids
Sequence
(BLAST)
(BLAST)
001: MPRPRSRGRG KTRSGFQRMD PEEGIIPPAP EQAARDPTEE ESTAPVDEER ADTAALTGED EGASENEAER TREELERTVT ELSIQNEYLK SQIAGAQQLA
101: NSAEVEIGSG RDDDDDSELV RSLKEQVERL SKEVQEQKQT QKVAEAALEH VNTSYAEADV KAQELTAKLN EAQLKIEKEL KERDDKYVEL DTKFQRLHKR
201: AKNRIQDIQK EKDDLEARFN EINQKAMETA SLQLAAQQEL ERVRHQASEA LRAMDAERQQ LRAVNNKLRC NFDETRLALE ARNSALEKLQ LSMLEKEQML
301: EQIQRSMHSA EDKRLASVSE LSAKHHKQLE SLEAQLAEVS AERTKASETI QSLQMVLAEK DSEITGIEAV STGEAARLNA TLEEIKGELA HLKDQHEKER
401: QSWEAECESL REKLEASEGA HFRSEIESTK FRNQLESELS TQNQLLQNKD SDVISAKEEI GRLESEFSAY KIRAHALLQR KDAELSAAQN SDVLKAHEEE
501: IREAEKEVAA ALEERDEAIQ DLQAAQCRHS EEIEARDLGL AEVDKKLKNV MKKLDYVTSQ FLSEKESWQK KLASVEESWR LKCESMKGQS NGHFEDHLQK
601: NLGEWTLKYE KLKEEHESFR DISDRMIEEK EQEIAKLLNE NKDLHHSLEA KAAVSNSDNQ SPGYVKQDAL SIELAEQQIL LLARQQAQRE EELGQSQRHI
701: LALQQEIEDL ERENRLHDQQ EAMLKAELRN MERSQKREGI DMTYLKNVIL KLLETGEVGA LLPVVAMLLQ FSPDELNKCQ HGVLSNVASP PATALSDGGS
801: TPNSFFGRFT F
101: NSAEVEIGSG RDDDDDSELV RSLKEQVERL SKEVQEQKQT QKVAEAALEH VNTSYAEADV KAQELTAKLN EAQLKIEKEL KERDDKYVEL DTKFQRLHKR
201: AKNRIQDIQK EKDDLEARFN EINQKAMETA SLQLAAQQEL ERVRHQASEA LRAMDAERQQ LRAVNNKLRC NFDETRLALE ARNSALEKLQ LSMLEKEQML
301: EQIQRSMHSA EDKRLASVSE LSAKHHKQLE SLEAQLAEVS AERTKASETI QSLQMVLAEK DSEITGIEAV STGEAARLNA TLEEIKGELA HLKDQHEKER
401: QSWEAECESL REKLEASEGA HFRSEIESTK FRNQLESELS TQNQLLQNKD SDVISAKEEI GRLESEFSAY KIRAHALLQR KDAELSAAQN SDVLKAHEEE
501: IREAEKEVAA ALEERDEAIQ DLQAAQCRHS EEIEARDLGL AEVDKKLKNV MKKLDYVTSQ FLSEKESWQK KLASVEESWR LKCESMKGQS NGHFEDHLQK
601: NLGEWTLKYE KLKEEHESFR DISDRMIEEK EQEIAKLLNE NKDLHHSLEA KAAVSNSDNQ SPGYVKQDAL SIELAEQQIL LLARQQAQRE EELGQSQRHI
701: LALQQEIEDL ERENRLHDQQ EAMLKAELRN MERSQKREGI DMTYLKNVIL KLLETGEVGA LLPVVAMLLQ FSPDELNKCQ HGVLSNVASP PATALSDGGS
801: TPNSFFGRFT F
001: MSEDKESDVV GEEEESHVIK EDKELNDASN ETLTENGDQL LQMIAELRLE NDFLRSQFEG LKDEVAQGRS LQKAEQVEAD SAQLKQLQEQ VASLSREIDV
101: EKQTRVAAEQ ALEHLREAYS EADAKSQEYS SKFSQVEQKL DQEIKERDEK YADLDAKFTR LHKRAKQRIQ EIQKEKDDLD ARFREVNETA ERASSQHSSM
201: QQELERTRQQ ANEALKAMDA ERQQLRSANN KLRDTIEELR GSLQPKENKI ETLQQSLLDK DQILEDLKKQ LQAVEERKQI AVTELSAKHQ KNLEGLEAQV
301: VDALSERDKA AETISSLQVL LAEKESKIAE MEAAATGEAA RLRAAAETLK GELAHLKSEN EKEKETWEAS CDALKSKLEI AESNYLQAEI EVAKMRSQLG
401: SEMSMQTQIL STKDAELKGA REEINRLQSE FSSYKIRAHA LLQKKDMELA AAKDSEQIKS LEEALKEAEK EVYLVSAERD RAQQDLQSAL ASLEKELEER
501: AGALKDASEQ IKSLEVKLDS TVARNQAEKQ AWEEDLRVLE ETWRRRCEAL TAQNEASPAE GIEKELENAK LRNKRMKEEH ESVRELADRL IEEKDREISR
601: LVDEMTNLRK SMESKPVWNK SPSQVHHYGN NNTESQQQDV SNLSTSAAEH QILILARQQA QREEELAQTQ RHILALQEEI EELERENRLH SQQEAVLKTE
701: LREMERKQKR EGVDMTYLKN VILKLLETGE VEALLPVVGM LLQFSPEEIQ KCQQAYHSST TAATTTEATP SPASEGSGLS VFSRFSFS
101: EKQTRVAAEQ ALEHLREAYS EADAKSQEYS SKFSQVEQKL DQEIKERDEK YADLDAKFTR LHKRAKQRIQ EIQKEKDDLD ARFREVNETA ERASSQHSSM
201: QQELERTRQQ ANEALKAMDA ERQQLRSANN KLRDTIEELR GSLQPKENKI ETLQQSLLDK DQILEDLKKQ LQAVEERKQI AVTELSAKHQ KNLEGLEAQV
301: VDALSERDKA AETISSLQVL LAEKESKIAE MEAAATGEAA RLRAAAETLK GELAHLKSEN EKEKETWEAS CDALKSKLEI AESNYLQAEI EVAKMRSQLG
401: SEMSMQTQIL STKDAELKGA REEINRLQSE FSSYKIRAHA LLQKKDMELA AAKDSEQIKS LEEALKEAEK EVYLVSAERD RAQQDLQSAL ASLEKELEER
501: AGALKDASEQ IKSLEVKLDS TVARNQAEKQ AWEEDLRVLE ETWRRRCEAL TAQNEASPAE GIEKELENAK LRNKRMKEEH ESVRELADRL IEEKDREISR
601: LVDEMTNLRK SMESKPVWNK SPSQVHHYGN NNTESQQQDV SNLSTSAAEH QILILARQQA QREEELAQTQ RHILALQEEI EELERENRLH SQQEAVLKTE
701: LREMERKQKR EGVDMTYLKN VILKLLETGE VEALLPVVGM LLQFSPEEIQ KCQQAYHSST TAATTTEATP SPASEGSGLS VFSRFSFS
Arabidopsis Description
GRIPProtein GRIP [Source:UniProtKB/Swiss-Prot;Acc:Q8S2T0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.