Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS7A01G284000.3 | |
| TraesCS7B01G181400.1 | |
| TraesCS7D01G282400.1 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G234700.2 | Wheat | cytosol, mitochondrion, nucleus, plastid | 98.77 | 98.77 |
| TraesCS2B01G259500.1 | Wheat | mitochondrion | 98.03 | 98.03 |
| HORVU2Hr1G059110.2 | Barley | cytosol | 15.29 | 93.94 |
| HORVU2Hr1G059170.7 | Barley | mitochondrion | 93.22 | 93.22 |
| Os07t0472500-01 | Rice | nucleus | 73.0 | 74.47 |
| KXG36201 | Sorghum | cytosol | 71.02 | 74.42 |
| KRH28898 | Soybean | cytosol | 11.47 | 70.99 |
| Zm00001d006357_P001 | Maize | cytosol | 64.61 | 67.44 |
| VIT_04s0210g00200.t01 | Wine grape | cytosol | 52.9 | 53.76 |
| KRH76555 | Soybean | cytosol | 50.55 | 51.7 |
| Solyc02g082840.2.1 | Tomato | nucleus | 50.55 | 51.64 |
| AT5G66030.1 | Thale cress | nucleus | 48.21 | 49.62 |
| KRH28897 | Soybean | cytosol | 38.96 | 47.88 |
| GSMUA_AchrUn_... | Banana | cytosol | 6.29 | 35.17 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G238300.1 | EnsemblPlantsGene:TraesCS2D01G238300 | InterPro:GRIP_dom | InterPro:IPR000237 | ncoils:Coil | PANTHER:PTHR23160 |
| PFAM:PF01465 | PFscan:PS50913 | SEG:seg | SMART:SM00755 | MapMan:22.6.7.1 | : |
Description
No Description!
Coordinates
chr2D:-:247819074..247848925
Molecular Weight (calculated)
92310.0 Da
IEP (calculated)
4.832
GRAVY (calculated)
-0.914
Length
811 amino acids
Sequence
(BLAST)
(BLAST)
001: MPRPRPRGRG KTRSGSQRMD PEEGTTPPAP EQAACDPSQE ESAAPVDEER ADTDAVAGED QGASENEAER TREELERTVT ELSIQNEYLK SQIAGAQQLA
101: NSAEVGIGSG REDEDDSELV RSLKEQVERL SKEVQEQKQT QKVAEAALEH VNMSYAEADG KVQELTAKLN QAQLKIEKEL KERDEKYVEL DTKFQRLHKR
201: AKNRIQDIQK EKDDLEARFN EINQKAMETA SLQLAAQQEL ERARHQASEA LRAMDAERQQ LRTVNNKLRC NFDETRLALE ARNNALEKLQ QSMLEKEQML
301: EQIQRSMQSA EEKRHASVSE LSAKHRKQLE SMEAQLAEVS AERTKASETI QSLQMVLAEK DSEITGIEAA STGEAARLKA TLEEIKGELT HLKDQHEKER
401: QSWEAECESL REKLEALESA RFRSEIESAK FRNQLESELS TQNQLLQNKD SNLISAKEEI SRLESEFSAY KIRAHALLQR KDAELSAAQN SDVLKAHEEA
501: IREAEKEVAA ALEERDEAIQ DLQVAQCRHS EEIEARDLGL AELDKKLKNV MKKLDYVTSQ FLSEKESWEK KLASVEESWR LKCESMKGQS NGHVEDHLQK
601: NLGEWTLKYE KLKEEHESFR DISDRMIEEK EREIAKLLNA NKDLHHSLEA KAAVSKRDNQ SPGYIKQDAL SIELAEQQIL LLARQQAQRE EELSQSHRHI
701: LALQQEVEDL ERENRLHDQQ EAMLKAELRN MERSQKREGV DMTYLKNVIL KLLETGEVGA LLPVVAMLLQ FSPDELNKCQ HGVLSNVASL PATALSDGGS
801: TPNSFFGRFT F
101: NSAEVGIGSG REDEDDSELV RSLKEQVERL SKEVQEQKQT QKVAEAALEH VNMSYAEADG KVQELTAKLN QAQLKIEKEL KERDEKYVEL DTKFQRLHKR
201: AKNRIQDIQK EKDDLEARFN EINQKAMETA SLQLAAQQEL ERARHQASEA LRAMDAERQQ LRTVNNKLRC NFDETRLALE ARNNALEKLQ QSMLEKEQML
301: EQIQRSMQSA EEKRHASVSE LSAKHRKQLE SMEAQLAEVS AERTKASETI QSLQMVLAEK DSEITGIEAA STGEAARLKA TLEEIKGELT HLKDQHEKER
401: QSWEAECESL REKLEALESA RFRSEIESAK FRNQLESELS TQNQLLQNKD SNLISAKEEI SRLESEFSAY KIRAHALLQR KDAELSAAQN SDVLKAHEEA
501: IREAEKEVAA ALEERDEAIQ DLQVAQCRHS EEIEARDLGL AELDKKLKNV MKKLDYVTSQ FLSEKESWEK KLASVEESWR LKCESMKGQS NGHVEDHLQK
601: NLGEWTLKYE KLKEEHESFR DISDRMIEEK EREIAKLLNA NKDLHHSLEA KAAVSKRDNQ SPGYIKQDAL SIELAEQQIL LLARQQAQRE EELSQSHRHI
701: LALQQEVEDL ERENRLHDQQ EAMLKAELRN MERSQKREGV DMTYLKNVIL KLLETGEVGA LLPVVAMLLQ FSPDELNKCQ HGVLSNVASL PATALSDGGS
801: TPNSFFGRFT F
001: MSEDKESDVV GEEEESHVIK EDKELNDASN ETLTENGDQL LQMIAELRLE NDFLRSQFEG LKDEVAQGRS LQKAEQVEAD SAQLKQLQEQ VASLSREIDV
101: EKQTRVAAEQ ALEHLREAYS EADAKSQEYS SKFSQVEQKL DQEIKERDEK YADLDAKFTR LHKRAKQRIQ EIQKEKDDLD ARFREVNETA ERASSQHSSM
201: QQELERTRQQ ANEALKAMDA ERQQLRSANN KLRDTIEELR GSLQPKENKI ETLQQSLLDK DQILEDLKKQ LQAVEERKQI AVTELSAKHQ KNLEGLEAQV
301: VDALSERDKA AETISSLQVL LAEKESKIAE MEAAATGEAA RLRAAAETLK GELAHLKSEN EKEKETWEAS CDALKSKLEI AESNYLQAEI EVAKMRSQLG
401: SEMSMQTQIL STKDAELKGA REEINRLQSE FSSYKIRAHA LLQKKDMELA AAKDSEQIKS LEEALKEAEK EVYLVSAERD RAQQDLQSAL ASLEKELEER
501: AGALKDASEQ IKSLEVKLDS TVARNQAEKQ AWEEDLRVLE ETWRRRCEAL TAQNEASPAE GIEKELENAK LRNKRMKEEH ESVRELADRL IEEKDREISR
601: LVDEMTNLRK SMESKPVWNK SPSQVHHYGN NNTESQQQDV SNLSTSAAEH QILILARQQA QREEELAQTQ RHILALQEEI EELERENRLH SQQEAVLKTE
701: LREMERKQKR EGVDMTYLKN VILKLLETGE VEALLPVVGM LLQFSPEEIQ KCQQAYHSST TAATTTEATP SPASEGSGLS VFSRFSFS
101: EKQTRVAAEQ ALEHLREAYS EADAKSQEYS SKFSQVEQKL DQEIKERDEK YADLDAKFTR LHKRAKQRIQ EIQKEKDDLD ARFREVNETA ERASSQHSSM
201: QQELERTRQQ ANEALKAMDA ERQQLRSANN KLRDTIEELR GSLQPKENKI ETLQQSLLDK DQILEDLKKQ LQAVEERKQI AVTELSAKHQ KNLEGLEAQV
301: VDALSERDKA AETISSLQVL LAEKESKIAE MEAAATGEAA RLRAAAETLK GELAHLKSEN EKEKETWEAS CDALKSKLEI AESNYLQAEI EVAKMRSQLG
401: SEMSMQTQIL STKDAELKGA REEINRLQSE FSSYKIRAHA LLQKKDMELA AAKDSEQIKS LEEALKEAEK EVYLVSAERD RAQQDLQSAL ASLEKELEER
501: AGALKDASEQ IKSLEVKLDS TVARNQAEKQ AWEEDLRVLE ETWRRRCEAL TAQNEASPAE GIEKELENAK LRNKRMKEEH ESVRELADRL IEEKDREISR
601: LVDEMTNLRK SMESKPVWNK SPSQVHHYGN NNTESQQQDV SNLSTSAAEH QILILARQQA QREEELAQTQ RHILALQEEI EELERENRLH SQQEAVLKTE
701: LREMERKQKR EGVDMTYLKN VILKLLETGE VEALLPVVGM LLQFSPEEIQ KCQQAYHSST TAATTTEATP SPASEGSGLS VFSRFSFS
Arabidopsis Description
GRIPProtein GRIP [Source:UniProtKB/Swiss-Prot;Acc:Q8S2T0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.