Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os08t0248900-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G66030.1 | Os08t0248900-01 | AT2G24765.1 | 16236155 |
| AT5G66030.1 | Os08t0248900-01 | AT2G24765.1 | 16830178 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G059110.2 | Barley | cytosol | 14.47 | 87.12 |
| KXG36201 | Sorghum | cytosol | 74.84 | 76.87 |
| TraesCS2D01G238300.1 | Wheat | mitochondrion | 74.47 | 73.0 |
| TraesCS2A01G234700.2 | Wheat | cytosol, mitochondrion, nucleus, plastid | 74.21 | 72.75 |
| TraesCS2B01G259500.1 | Wheat | mitochondrion | 74.09 | 72.63 |
| KRH28898 | Soybean | cytosol | 11.95 | 72.52 |
| HORVU2Hr1G059170.7 | Barley | mitochondrion | 73.33 | 71.89 |
| Zm00001d006357_P001 | Maize | cytosol | 68.43 | 70.01 |
| VIT_04s0210g00200.t01 | Wine grape | cytosol | 55.6 | 55.39 |
| KRH76555 | Soybean | cytosol | 52.58 | 52.71 |
| Solyc02g082840.2.1 | Tomato | nucleus | 51.82 | 51.89 |
| AT5G66030.1 | Thale cress | nucleus | 50.19 | 50.63 |
| KRH28897 | Soybean | cytosol | 40.5 | 48.79 |
| GSMUA_AchrUn_... | Banana | cytosol | 7.42 | 40.69 |
Protein Annotations
| MapMan:22.6.7.1 | EntrezGene:4343206 | ProteinID:BAC83565.1 | ProteinID:BAF21528.1 | ProteinID:BAT01435.1 | ncoils:Coil |
| GO:GO:0000003 | GO:GO:0000795 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006259 | GO:GO:0007049 | GO:GO:0007131 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016043 | InterPro:GRIP_dom | InterPro:IPR000237 | EnsemblPlantsGene:Os07g0472500 | EnsemblPlants:Os07t0472500-01 |
| PFAM:PF01465 | PFscan:PS50913 | PANTHER:PTHR23160 | UniProt:Q7F099 | SMART:SM00755 | UniParc:UPI00001BF382 |
| RefSeq:XP_015647560.1 | SEG:seg | : | : | : | : |
Description
Similar to Myosin heavy chain-like protein (Fragment). (Os07t0472500-01)
Coordinates
chr7:+:16971981..16984817
Molecular Weight (calculated)
89294.5 Da
IEP (calculated)
4.718
GRAVY (calculated)
-0.825
Length
795 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPDENPTPP PPYQEAEAAV PVDEQPPPPV EEEQAEAARQ ESAAPVEQDA AAAEGGGGDR AAGGERSREE LERVVMELGF QNDYLKSQIA AAEGGSGAAE
101: SELVKGLKEQ VERLRKEVEE HKQTQKATEA ALEHVNVAYA EADAKVQDLT AKLTQAQQKM DKELKERDEK YVELDTKFQR LHKRAKQRIQ DIQKEKDDME
201: ARFNEINQKA EQASSLQSAA QQELERARQQ ASEALRSMDA ERQQLRTVNS KLRTNLDEAR VALEARNNVL EKLRQSMFEK EQLLEQTQAS LQSAEEKRNA
301: SIAELTAKHQ KQLESLEAQL TEVSAERTKA SETIQSLQML LVEKDSEIAE IEAASTGEAA RIRAAMEELK GELAHLKDQH EKERQNWETT CESLRTKLEA
401: SESACHISVI ESTKVKSQLE LELSKQNQLL QTKDSDLLAA KDEISRLESE FSAYKVRAHA LLQKKDAELN TAKNSDLIKA HEEAIREAEK EISAALAERD
501: KAIHDLQIAQ SKYGEEIEAR DLALADSDKK LKNVMAKLDS LTSKFLSEKE SWEKNVASVE ESWRLKCESV KAESNGHAGD ELKKNLVELT VKHEKLKEEH
601: DSFRDIADRM LEEKDREVAK LLRENKDLHN SLEAKAAVSI NGNQNPGPAK QDAMDIELAE QQILLLARQQ AQREEELAQS QRHILALQQE IEELERENRL
701: HDQQEAMLKT ELRNMERSQK REGIDMTYLK NVILKLLETG EVGALLPVVA TLLQFSPEEL TKCQHGVLSA VASSPATAVP DGGSTPNSFF SRFTF
101: SELVKGLKEQ VERLRKEVEE HKQTQKATEA ALEHVNVAYA EADAKVQDLT AKLTQAQQKM DKELKERDEK YVELDTKFQR LHKRAKQRIQ DIQKEKDDME
201: ARFNEINQKA EQASSLQSAA QQELERARQQ ASEALRSMDA ERQQLRTVNS KLRTNLDEAR VALEARNNVL EKLRQSMFEK EQLLEQTQAS LQSAEEKRNA
301: SIAELTAKHQ KQLESLEAQL TEVSAERTKA SETIQSLQML LVEKDSEIAE IEAASTGEAA RIRAAMEELK GELAHLKDQH EKERQNWETT CESLRTKLEA
401: SESACHISVI ESTKVKSQLE LELSKQNQLL QTKDSDLLAA KDEISRLESE FSAYKVRAHA LLQKKDAELN TAKNSDLIKA HEEAIREAEK EISAALAERD
501: KAIHDLQIAQ SKYGEEIEAR DLALADSDKK LKNVMAKLDS LTSKFLSEKE SWEKNVASVE ESWRLKCESV KAESNGHAGD ELKKNLVELT VKHEKLKEEH
601: DSFRDIADRM LEEKDREVAK LLRENKDLHN SLEAKAAVSI NGNQNPGPAK QDAMDIELAE QQILLLARQQ AQREEELAQS QRHILALQQE IEELERENRL
701: HDQQEAMLKT ELRNMERSQK REGIDMTYLK NVILKLLETG EVGALLPVVA TLLQFSPEEL TKCQHGVLSA VASSPATAVP DGGSTPNSFF SRFTF
001: MSEDKESDVV GEEEESHVIK EDKELNDASN ETLTENGDQL LQMIAELRLE NDFLRSQFEG LKDEVAQGRS LQKAEQVEAD SAQLKQLQEQ VASLSREIDV
101: EKQTRVAAEQ ALEHLREAYS EADAKSQEYS SKFSQVEQKL DQEIKERDEK YADLDAKFTR LHKRAKQRIQ EIQKEKDDLD ARFREVNETA ERASSQHSSM
201: QQELERTRQQ ANEALKAMDA ERQQLRSANN KLRDTIEELR GSLQPKENKI ETLQQSLLDK DQILEDLKKQ LQAVEERKQI AVTELSAKHQ KNLEGLEAQV
301: VDALSERDKA AETISSLQVL LAEKESKIAE MEAAATGEAA RLRAAAETLK GELAHLKSEN EKEKETWEAS CDALKSKLEI AESNYLQAEI EVAKMRSQLG
401: SEMSMQTQIL STKDAELKGA REEINRLQSE FSSYKIRAHA LLQKKDMELA AAKDSEQIKS LEEALKEAEK EVYLVSAERD RAQQDLQSAL ASLEKELEER
501: AGALKDASEQ IKSLEVKLDS TVARNQAEKQ AWEEDLRVLE ETWRRRCEAL TAQNEASPAE GIEKELENAK LRNKRMKEEH ESVRELADRL IEEKDREISR
601: LVDEMTNLRK SMESKPVWNK SPSQVHHYGN NNTESQQQDV SNLSTSAAEH QILILARQQA QREEELAQTQ RHILALQEEI EELERENRLH SQQEAVLKTE
701: LREMERKQKR EGVDMTYLKN VILKLLETGE VEALLPVVGM LLQFSPEEIQ KCQQAYHSST TAATTTEATP SPASEGSGLS VFSRFSFS
101: EKQTRVAAEQ ALEHLREAYS EADAKSQEYS SKFSQVEQKL DQEIKERDEK YADLDAKFTR LHKRAKQRIQ EIQKEKDDLD ARFREVNETA ERASSQHSSM
201: QQELERTRQQ ANEALKAMDA ERQQLRSANN KLRDTIEELR GSLQPKENKI ETLQQSLLDK DQILEDLKKQ LQAVEERKQI AVTELSAKHQ KNLEGLEAQV
301: VDALSERDKA AETISSLQVL LAEKESKIAE MEAAATGEAA RLRAAAETLK GELAHLKSEN EKEKETWEAS CDALKSKLEI AESNYLQAEI EVAKMRSQLG
401: SEMSMQTQIL STKDAELKGA REEINRLQSE FSSYKIRAHA LLQKKDMELA AAKDSEQIKS LEEALKEAEK EVYLVSAERD RAQQDLQSAL ASLEKELEER
501: AGALKDASEQ IKSLEVKLDS TVARNQAEKQ AWEEDLRVLE ETWRRRCEAL TAQNEASPAE GIEKELENAK LRNKRMKEEH ESVRELADRL IEEKDREISR
601: LVDEMTNLRK SMESKPVWNK SPSQVHHYGN NNTESQQQDV SNLSTSAAEH QILILARQQA QREEELAQTQ RHILALQEEI EELERENRLH SQQEAVLKTE
701: LREMERKQKR EGVDMTYLKN VILKLLETGE VEALLPVVGM LLQFSPEEIQ KCQQAYHSST TAATTTEATP SPASEGSGLS VFSRFSFS
Arabidopsis Description
GRIPProtein GRIP [Source:UniProtKB/Swiss-Prot;Acc:Q8S2T0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.