Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G66030.1 | KRH02913 | AT2G24765.1 | 16236155 |
| AT5G66030.1 | KRH18982 | AT2G24765.1 | 16236155 |
| AT5G66030.1 | KRH02913 | AT2G24765.1 | 16830178 |
| AT5G66030.1 | KRH18982 | AT2G24765.1 | 16830178 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH76555 | Soybean | cytosol | 95.3 | 79.32 |
| GSMUA_AchrUn_... | Banana | nucleus | 9.09 | 60.0 |
| VIT_04s0210g00200.t01 | Wine grape | cytosol | 66.21 | 54.76 |
| Solyc02g082840.2.1 | Tomato | nucleus | 61.67 | 51.26 |
| AT5G66030.1 | Thale cress | nucleus | 58.48 | 48.98 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, golgi, vacuole | 24.09 | 44.92 |
| KXG36201 | Sorghum | cytosol | 47.73 | 40.7 |
| Os07t0472500-01 | Rice | nucleus | 48.79 | 40.5 |
| Zm00001d006357_P001 | Maize | cytosol | 46.36 | 39.38 |
| TraesCS2D01G238300.1 | Wheat | mitochondrion | 47.88 | 38.96 |
| TraesCS2B01G259500.1 | Wheat | mitochondrion | 47.73 | 38.84 |
| TraesCS2A01G234700.2 | Wheat | cytosol, mitochondrion, nucleus, plastid | 47.58 | 38.72 |
| HORVU2Hr1G059170.7 | Barley | mitochondrion | 47.42 | 38.59 |
| GSMUA_AchrUn_... | Banana | nucleus | 16.82 | 31.81 |
| GSMUA_AchrUn_... | Banana | cytosol | 2.73 | 12.41 |
| HORVU2Hr1G059110.2 | Barley | cytosol | 2.12 | 10.61 |
| KRH28898 | Soybean | cytosol | 0.0 | 0.0 |
Protein Annotations
| EMBL:ACUP02006769 | EnsemblPlants:KRH28897 | EnsemblPlantsGene:GLYMA_11G0842002 | ncoils:Coil | PANTHER:PTHR23160 | ProteinID:KRH28897 |
| ProteinID:KRH28897.1 | SEG:seg | UniParc:UPI0006ED675E | UniProt:A0A0R0HDY4 | MapMan:22.6.7.1 | : |
Description
hypothetical protein
Coordinates
chr11:+:6327560..6335507
Molecular Weight (calculated)
75331.6 Da
IEP (calculated)
4.655
GRAVY (calculated)
-0.965
Length
660 amino acids
Sequence
(BLAST)
(BLAST)
001: MMDTHAEDSA RPEENLPDVT HHNEDGSNRN LILENGLSDS DQGPADTHDQ LLQMVMDLRF QNDFLKSQFE GFKNVDSVHS DSSIQKGVGG SEDGESDIVK
101: ELKEKIQLLN KEFLEEKQTR IASEEALKHL QTAYSEAEAK AQELSEKLAE ARTKLDQVKE REEKYSELDS KFNRLHKRAK QRIQEVQKEK DDLEARFSEV
201: NEIAERASSQ QSALQQELER TRKQANEALK AMDSDRQQLR SANNNLRDTM EDLRRSLQPK ENAIEALQQS IAEKEQMLED MRGLLQAAEE KRQAALAELS
301: AKHQKNIESL EAQINDALSD RSKATESISS LQVLVAEKES RIAEMEAAST GEAARLRAAV ESVKGELSHI KEEHENERES WETASQALKA KLEIAESNCI
401: RAEVEVAKIR SQLESEVSTQ TRILNMRDAE LLAAKEEISS LEKEFSSYKV RAHALLQKKD AELAAAKDSE QLKDLEETLK EVENEVLSIT EERDRVLQDL
501: QSAMANHEKE LAERDTALEN VKQQIRSLEI KLDSANAKHL KEKEEWGLSL QNVQETWRIR CEAMKAENEA TATKDMQKEL EELKQRCKKL KEEHASFHDL
601: ADRMIEEKDY EISRLLDENK NLRQSLQSRP SVDQNDNYTT ALHKLDATNL SPSEAEQQIL
101: ELKEKIQLLN KEFLEEKQTR IASEEALKHL QTAYSEAEAK AQELSEKLAE ARTKLDQVKE REEKYSELDS KFNRLHKRAK QRIQEVQKEK DDLEARFSEV
201: NEIAERASSQ QSALQQELER TRKQANEALK AMDSDRQQLR SANNNLRDTM EDLRRSLQPK ENAIEALQQS IAEKEQMLED MRGLLQAAEE KRQAALAELS
301: AKHQKNIESL EAQINDALSD RSKATESISS LQVLVAEKES RIAEMEAAST GEAARLRAAV ESVKGELSHI KEEHENERES WETASQALKA KLEIAESNCI
401: RAEVEVAKIR SQLESEVSTQ TRILNMRDAE LLAAKEEISS LEKEFSSYKV RAHALLQKKD AELAAAKDSE QLKDLEETLK EVENEVLSIT EERDRVLQDL
501: QSAMANHEKE LAERDTALEN VKQQIRSLEI KLDSANAKHL KEKEEWGLSL QNVQETWRIR CEAMKAENEA TATKDMQKEL EELKQRCKKL KEEHASFHDL
601: ADRMIEEKDY EISRLLDENK NLRQSLQSRP SVDQNDNYTT ALHKLDATNL SPSEAEQQIL
001: MSEDKESDVV GEEEESHVIK EDKELNDASN ETLTENGDQL LQMIAELRLE NDFLRSQFEG LKDEVAQGRS LQKAEQVEAD SAQLKQLQEQ VASLSREIDV
101: EKQTRVAAEQ ALEHLREAYS EADAKSQEYS SKFSQVEQKL DQEIKERDEK YADLDAKFTR LHKRAKQRIQ EIQKEKDDLD ARFREVNETA ERASSQHSSM
201: QQELERTRQQ ANEALKAMDA ERQQLRSANN KLRDTIEELR GSLQPKENKI ETLQQSLLDK DQILEDLKKQ LQAVEERKQI AVTELSAKHQ KNLEGLEAQV
301: VDALSERDKA AETISSLQVL LAEKESKIAE MEAAATGEAA RLRAAAETLK GELAHLKSEN EKEKETWEAS CDALKSKLEI AESNYLQAEI EVAKMRSQLG
401: SEMSMQTQIL STKDAELKGA REEINRLQSE FSSYKIRAHA LLQKKDMELA AAKDSEQIKS LEEALKEAEK EVYLVSAERD RAQQDLQSAL ASLEKELEER
501: AGALKDASEQ IKSLEVKLDS TVARNQAEKQ AWEEDLRVLE ETWRRRCEAL TAQNEASPAE GIEKELENAK LRNKRMKEEH ESVRELADRL IEEKDREISR
601: LVDEMTNLRK SMESKPVWNK SPSQVHHYGN NNTESQQQDV SNLSTSAAEH QILILARQQA QREEELAQTQ RHILALQEEI EELERENRLH SQQEAVLKTE
701: LREMERKQKR EGVDMTYLKN VILKLLETG
101: EKQTRVAAEQ ALEHLREAYS EADAKSQEYS SKFSQVEQKL DQEIKERDEK YADLDAKFTR LHKRAKQRIQ EIQKEKDDLD ARFREVNETA ERASSQHSSM
201: QQELERTRQQ ANEALKAMDA ERQQLRSANN KLRDTIEELR GSLQPKENKI ETLQQSLLDK DQILEDLKKQ LQAVEERKQI AVTELSAKHQ KNLEGLEAQV
301: VDALSERDKA AETISSLQVL LAEKESKIAE MEAAATGEAA RLRAAAETLK GELAHLKSEN EKEKETWEAS CDALKSKLEI AESNYLQAEI EVAKMRSQLG
401: SEMSMQTQIL STKDAELKGA REEINRLQSE FSSYKIRAHA LLQKKDMELA AAKDSEQIKS LEEALKEAEK EVYLVSAERD RAQQDLQSAL ASLEKELEER
501: AGALKDASEQ IKSLEVKLDS TVARNQAEKQ AWEEDLRVLE ETWRRRCEAL TAQNEASPAE GIEKELENAK LRNKRMKEEH ESVRELADRL IEEKDREISR
601: LVDEMTNLRK SMESKPVWNK SPSQVHHYGN NNTESQQQDV SNLSTSAAEH QILILARQQA QREEELAQTQ RHILALQEEI EELERENRLH SQQEAVLKTE
701: LREMERKQKR EGVDMTYLKN VILKLLETG
Arabidopsis Description
GRIPProtein GRIP [Source:UniProtKB/Swiss-Prot;Acc:Q8S2T0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.