Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- mitochondrion 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G18960.1 | Thale cress | nucleus | 64.74 | 58.85 |
| CDX99294 | Canola | nucleus | 52.11 | 47.83 |
| CDX92291 | Canola | nucleus, plastid | 46.84 | 41.98 |
| Bra022374.1-P | Field mustard | nucleus, plastid | 46.84 | 41.59 |
| AT1G49475.1 | Thale cress | mitochondrion, nucleus | 36.84 | 36.84 |
| AT3G18990.2 | Thale cress | nucleus | 24.74 | 12.63 |
| Solyc08g068540.2.1 | Tomato | nucleus | 24.74 | 9.42 |
| Solyc07g054630.2.1 | Tomato | nucleus | 24.21 | 7.96 |
| PGSC0003DMT400047299 | Potato | nucleus | 17.37 | 6.21 |
| AT1G49480.2 | Thale cress | nucleus | 6.84 | 5.75 |
Protein Annotations
| MapMan:15.5.5.2 | Gene3D:2.40.330.10 | EntrezGene:828118 | ProteinID:AAC72857.1 | ProteinID:AEE82045.1 | EMBL:AK175333 |
| ArrayExpress:AT4G01580 | EnsemblPlantsGene:AT4G01580 | RefSeq:AT4G01580 | TAIR:AT4G01580 | RefSeq:AT4G01580-TAIR-G | EnsemblPlants:AT4G01580.1 |
| TAIR:AT4G01580.1 | InterPro:B3_DNA-bd | EMBL:BT010604 | ProteinID:CAB77728.1 | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003340 | InterPro:IPR015300 | RefSeq:NP_192068.1 | PFAM:PF02362 |
| PFscan:PS50863 | PANTHER:PTHR31674 | PANTHER:PTHR31674:SF1 | UniProt:Q9ZSH7 | SMART:SM01019 | SUPFAM:SSF101936 |
| UniParc:UPI00000A0156 | : | : | : | : | : |
Description
B3 domain-containing protein At4g01580 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSH7]
Coordinates
chr4:+:685670..686886
Molecular Weight (calculated)
22123.6 Da
IEP (calculated)
7.801
GRAVY (calculated)
-0.558
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MVITRNMKAR ATSVSHRQSQ QDPESPVKKF FKLVLPSTMK DKMMRIPPRF VKLQGSKLSE VVTLVTPAGY KRSIKLKRIG EEIWFHEGWS EFAEAHSIEE
101: GHFLLFEYKK NSSFRVIIFN ASACETNYPL DAVHIIDSDD DVIEITGKEF DTEHKSKKRP RDIEFDKILH DVDVMQVLKE EEEDKRVLRG
101: GHFLLFEYKK NSSFRVIIFN ASACETNYPL DAVHIIDSDD DVIEITGKEF DTEHKSKKRP RDIEFDKILH DVDVMQVLKE EEEDKRVLRG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.