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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 8
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr3P21650_001 Banana cytosol 31.42 78.2
Bra010359.1-P Field mustard plastid 69.49 70.99
VIT_07s0005g03800.t01 Wine grape plastid 54.38 55.21
Os01t0829000-01 Rice mitochondrion 52.27 54.57
TraesCS3B01G381100.1 Wheat mitochondrion, plastid 54.38 54.55
TraesCS3A01G349000.1 Wheat mitochondrion, plastid 54.08 54.41
TraesCS3D01G342900.1 Wheat mitochondrion, plastid 54.08 54.24
PGSC0003DMT400036037 Potato plastid 56.8 54.02
EES01697 Sorghum plastid 52.87 53.68
Zm00001d043009_P002 Maize plastid 52.87 53.52
Solyc02g079730.2.1 Tomato plastid 56.19 50.96
KRH58946 Soybean plastid 55.89 49.6
KRH42851 Soybean mitochondrion 54.68 48.79
HORVU3Hr1G087940.4 Barley cytosol, plastid 53.17 48.22
AT2G31840.1 Thale cress plastid 29.0 27.43
Protein Annotations
Gene3D:3.40.30.10MapMan:35.1EntrezGene:828977ProteinID:AEE85510.1EMBL:AK176513EMBL:AK176775
ArrayExpress:AT4G28590EnsemblPlantsGene:AT4G28590RefSeq:AT4G28590TAIR:AT4G28590RefSeq:AT4G28590-TAIR-GEnsemblPlants:AT4G28590.1
TAIR:AT4G28590.1ProteinID:CAB81447.1UniProt:F4JLC1GO:GO:0003674GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006139GO:GO:0006355
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009507GO:GO:0009536GO:GO:0009658
GO:GO:0009987GO:GO:0016043GO:GO:0042644RefSeq:NP_194588.2PO:PO:0000013PO:PO:0000037
PO:PO:0000084PO:PO:0000293PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507
PO:PO:0007064PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007131PO:PO:0007611
PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010
PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046
PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137
PO:PO:0025022PANTHER:PTHR34669PANTHER:PTHR34669:SF2SUPFAM:SSF52833InterPro:Thioredoxin-like_sfUniParc:UPI000034F12B
SEG:seg:::::
Description
MRL7FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily pr /.../(TAIR:AT2G31840.1); Has 114 Blast hits to 112 proteins in 39 species: Archae - 2; Bacteria - 0; Metazoa - 17; Fungi - 6; Plants - 67; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). [Source:TAIR;Acc:AT4G28590]
Coordinates
chr4:-:14125212..14127082
Molecular Weight (calculated)
38242.8 Da
IEP (calculated)
4.989
GRAVY (calculated)
-0.676
Length
331 amino acids
Sequence
(BLAST)
001: MSFFAVACSA PRSSMLLTGL NSSFSDMHRS PLFVFPVTIS SRSVKRFAAV SSDSVLDPES KNQTRSRRKN KEAVTPIAET ENNEKFPTKV PRKSKRGRRS
101: EADAVEDYVR SSLERTFSTI KEQNPEVFEN KEKANFIKDR GVDEEEEEEE EMVVEEEDPD WPVDTDVGWG IKASEYFDTH PIKNVVGDDG SEIDWEGEID
201: DSWVKEINCL EWESFAFHPS PLVVLVFERY KRASDNWKTL KELEKAIKVY WDAKDRLPPR AVKIDLNIET DLAYALKAKE CPQILFLRGN RILYREKDFR
301: TADELVHMIA HFYYKAKRPS CVDKANVTPY C
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.