Factsheet for HORVU3Hr1G087940.4

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 2
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G349000.1	Wheat	mitochondrion, plastid	84.11	93.31
TraesCS3B01G381100.1	Wheat	mitochondrion, plastid	83.29	92.12
TraesCS3D01G342900.1	Wheat	mitochondrion, plastid	82.19	90.91
GSMUA_Achr3P21650_001	Banana	cytosol	28.49	78.2
Os01t0829000-01	Rice	mitochondrion	67.12	77.29
Zm00001d043009_P002	Maize	plastid	67.12	74.92
EES01697	Sorghum	plastid	65.75	73.62
VIT_07s0005g03800.t01	Wine grape	plastid	50.14	56.13
Bra010359.1-P	Field mustard	plastid	48.49	54.63
AT4G28590.1	Thale cress	plastid	48.22	53.17
PGSC0003DMT400036037	Potato	plastid	50.41	52.87
Solyc02g079730.2.1	Tomato	plastid	50.41	50.41
KRH58946	Soybean	plastid	48.49	47.45
KRH42851	Soybean	mitochondrion	47.95	47.17
HORVU1Hr1G064560.5	Barley	plastid	24.38	27.38

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	UniProt:A0A287M4Q9	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009536	GO:GO:0009658	GO:GO:0009987	GO:GO:0016043	GO:GO:0042644	EnsemblPlantsGene:HORVU3Hr1G087940
EnsemblPlants:HORVU3Hr1G087940.4	PANTHER:PTHR34669	PANTHER:PTHR34669:SF2	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000B4607A9
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:623119733..623122051

Molecular Weight (calculated)

41699.3 Da

IEP (calculated)

8.221

GRAVY (calculated)

-0.825

Length

365 amino acids

Sequence
(BLAST)

001: TGHRQWQTSD SIHQGQPVAT ETQPPFPLRR LRPSSPRAML RLPALLPPKP SAPTTGLNPT RRSHGHRGPK RLLASPTTPP PPPPRRTPSP ATAPKPLKHE
101: PRATPQNPEG AAAEFPTTKP RKPRRGRRSE AAAVEDFVRD RLEQVFASIQ ERDPEVLQGK GDILKPKEDE ERVPDAETRE EDGKQKTVVE EEDPSWPLDA
201: DVGWGVRASD YFDKHSIKNV TVDGVEIDWE GEVDQGWVKE INCLEWESFA FHPSPLIVLV FERYNRAADN WRFLQELEKA TKVYWDTKDR LPPRTVKIDL
301: NIERDLAYAL QAKECPQLLF LRGNKILYRE KEIRTADELV QMIAFFYYNA KRPSFVNPEI LAPAF

Best Arabidopsis Sequence Match ( AT4G28590.1 )
(BLAST)

001: MSFFAVACSA PRSSMLLTGL NSSFSDMHRS PLFVFPVTIS SRSVKRFAAV SSDSVLDPES KNQTRSRRKN KEAVTPIAET ENNEKFPTKV PRKSKRGRRS
101: EADAVEDYVR SSLERTFSTI KEQNPEVFEN KEKANFIKDR GVDEEEEEEE EMVVEEEDPD WPVDTDVGWG IKASEYFDTH PIKNVVGDDG SEIDWEGEID
201: DSWVKEINCL EWESFAFHPS PLVVLVFERY KRASDNWKTL KELEKAIKVY WDAKDRLPPR AVKIDLNIET DLAYALKAKE CPQILFLRGN RILYREKDFR
301: TADELVHMIA HFYYKAKRPS CVDKANVTPY C

Arabidopsis Description

MRL7FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily pr /.../(TAIR:AT2G31840.1); Has 114 Blast hits to 112 proteins in 39 species: Archae - 2; Bacteria - 0; Metazoa - 17; Fungi - 6; Plants - 67; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). [Source:TAIR;Acc:AT4G28590]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.