Factsheet for Bra010359.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P21650_001	Banana	cytosol	32.1	78.2
AT4G28590.1	Thale cress	plastid	70.99	69.49
EES01697	Sorghum	plastid	57.41	57.06
Os01t0829000-01	Rice	mitochondrion	55.56	56.78
Zm00001d043009_P002	Maize	plastid	55.86	55.35
TraesCS3A01G349000.1	Wheat	mitochondrion, plastid	55.56	54.71
TraesCS3B01G381100.1	Wheat	mitochondrion, plastid	55.56	54.55
VIT_07s0005g03800.t01	Wine grape	plastid	54.63	54.29
TraesCS3D01G342900.1	Wheat	mitochondrion, plastid	55.25	54.24
PGSC0003DMT400036037	Potato	plastid	56.17	52.3
KRH58946	Soybean	plastid	58.33	50.67
KRH42851	Soybean	mitochondrion	57.1	49.87
Solyc02g079730.2.1	Tomato	plastid	55.86	49.59
HORVU3Hr1G087940.4	Barley	cytosol, plastid	54.63	48.49
Bra022868.1-P	Field mustard	plastid	27.78	26.63

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	EnsemblPlantsGene:Bra010359	EnsemblPlants:Bra010359.1	EnsemblPlants:Bra010359.1-P	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009536	GO:GO:0009658	GO:GO:0009987	GO:GO:0016043
GO:GO:0042644	UniProt:M4D1K9	PANTHER:PTHR34669	PANTHER:PTHR34669:SF2	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI000254548F	SEG:seg	:	:	:	:

Description

AT4G28590 (E=3e-138) | unknown protein

Coordinates

chrA08:+:14084944..14086359

Molecular Weight (calculated)

37256.7 Da

IEP (calculated)

4.833

GRAVY (calculated)

-0.702

Length

324 amino acids

Sequence
(BLAST)

001: MNLPVVACFA PRTPMLHTGL NYRFSDTNRS STLVSTARIP SRNLKPLAAV SSDAVPDPES NLKPKKEATE SENFPTKVPR KPKRGRRSEA DAVEDFVRSS
101: LEKTFSTIRE QNPEVFENKE KASFIKNRAE QSDEDDDESE GEGEMVVEEE DPDWPVDTDV GWGIKASEYF DTHPIKNVVG EDGTVIDWEG EIDDSWVKEI
201: NCLEWESFAF HPSPLVVLVF ERYKRASDNW KTLKELEKAI KVYWDAKDRL PPRAVKIDLN IETDLAYALK AKECPQILFL RGNRIVYREK DFRTADELVQ
301: MIAHFYYKAK RPSWIDKANV TPYC

Best Arabidopsis Sequence Match ( AT4G28590.1 )
(BLAST)

001: MSFFAVACSA PRSSMLLTGL NSSFSDMHRS PLFVFPVTIS SRSVKRFAAV SSDSVLDPES KNQTRSRRKN KEAVTPIAET ENNEKFPTKV PRKSKRGRRS
101: EADAVEDYVR SSLERTFSTI KEQNPEVFEN KEKANFIKDR GVDEEEEEEE EMVVEEEDPD WPVDTDVGWG IKASEYFDTH PIKNVVGDDG SEIDWEGEID
201: DSWVKEINCL EWESFAFHPS PLVVLVFERY KRASDNWKTL KELEKAIKVY WDAKDRLPPR AVKIDLNIET DLAYALKAKE CPQILFLRGN RILYREKDFR
301: TADELVHMIA HFYYKAKRPS CVDKANVTPY C

Arabidopsis Description

MRL7FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily pr /.../(TAIR:AT2G31840.1); Has 114 Blast hits to 112 proteins in 39 species: Archae - 2; Bacteria - 0; Metazoa - 17; Fungi - 6; Plants - 67; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). [Source:TAIR;Acc:AT4G28590]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.