CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043009_P002	Maize	plastid	90.8	90.52
GSMUA_Achr3P21650_001	Banana	cytosol	32.82	80.45
Os01t0829000-01	Rice	mitochondrion	73.31	75.39
TraesCS3A01G349000.1	Wheat	mitochondrion, plastid	75.77	75.08
TraesCS3B01G381100.1	Wheat	mitochondrion, plastid	75.46	74.55
TraesCS3D01G342900.1	Wheat	mitochondrion, plastid	75.46	74.55
HORVU3Hr1G087940.4	Barley	cytosol, plastid	73.62	65.75
Bra010359.1-P	Field mustard	plastid	57.06	57.41
VIT_07s0005g03800.t01	Wine grape	plastid	55.21	55.21
PGSC0003DMT400036037	Potato	plastid	56.44	52.87
AT4G28590.1	Thale cress	plastid	53.68	52.87
Solyc02g079730.2.1	Tomato	plastid	57.36	51.23
KRH58946	Soybean	plastid	56.75	49.6
KRH42851	Soybean	mitochondrion	56.44	49.6
EES19534	Sorghum	plastid	24.54	24.17

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	EntrezGene:8085417	UniProt:C5XNY3	EnsemblPlants:EES01697	ProteinID:EES01697
ProteinID:EES01697.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009536	GO:GO:0009658
GO:GO:0009987	GO:GO:0016043	GO:GO:0042644	PANTHER:PTHR34669	PANTHER:PTHR34669:SF2	EnsemblPlantsGene:SORBI_3003G342700
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0001A845ED	RefSeq:XP_002456577.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:+:66496575..66501406

Molecular Weight (calculated)

37168.6 Da

IEP (calculated)

5.585

GRAVY (calculated)

-0.768

Length

326 amino acids

Sequence
(BLAST)

001: MLRLPTLTAL KPSTPSASWN PVGCSHGRRR KLIFASSAPP PSSSSSRPPK PTSNPEPPKP THEARSRNPD DSTEAGFPRT KPRKPRRGRR SEAVAVEDFV
101: RGRLEQVFAS IRERNPDVLE GKGDILKPKA EEEQVPDEEE GEGEGEQKPV VEEEDPSWPL DADVGWGIRA SEYFDKHSIR NVTVDGVEID WEGEVDEGWV
201: KEINCLEWES FAFHPSPLVV LVFERYNRAA DNWKFLQELE KAAKVYWNAK DRLPPRTVKV DINIERDLAY ALQVRECPQL LFLRGNKILY REKEIRTADE
301: LVQMIAHFYY NARRPSCVNP EAVASF

Best Arabidopsis Sequence Match ( AT4G28590.1 )
(BLAST)

001: MSFFAVACSA PRSSMLLTGL NSSFSDMHRS PLFVFPVTIS SRSVKRFAAV SSDSVLDPES KNQTRSRRKN KEAVTPIAET ENNEKFPTKV PRKSKRGRRS
101: EADAVEDYVR SSLERTFSTI KEQNPEVFEN KEKANFIKDR GVDEEEEEEE EMVVEEEDPD WPVDTDVGWG IKASEYFDTH PIKNVVGDDG SEIDWEGEID
201: DSWVKEINCL EWESFAFHPS PLVVLVFERY KRASDNWKTL KELEKAIKVY WDAKDRLPPR AVKIDLNIET DLAYALKAKE CPQILFLRGN RILYREKDFR
301: TADELVHMIA HFYYKAKRPS CVDKANVTPY C

Arabidopsis Description

MRL7FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily pr /.../(TAIR:AT2G31840.1); Has 114 Blast hits to 112 proteins in 39 species: Archae - 2; Bacteria - 0; Metazoa - 17; Fungi - 6; Plants - 67; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). [Source:TAIR;Acc:AT4G28590]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.