CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010259_P001	Maize	nucleus	67.67	75.93
Os05t0417200-01	Rice	plastid	70.09	70.52
TraesCS1B01G270800.1	Wheat	plastid	68.58	68.79
TraesCS1D01G260200.1	Wheat	plastid	68.58	68.79
HORVU1Hr1G064560.5	Barley	plastid	67.37	68.62
TraesCS1A01G260300.2	Wheat	plastid	69.79	66.38
Solyc04g071420.2.1	Tomato	cytosol	40.79	58.19
VIT_05s0094g01460.t01	Wine grape	plastid	45.32	45.73
KRG90572	Soybean	plastid	44.11	43.84
PGSC0003DMT400061937	Potato	plastid	45.02	43.57
CDX79443	Canola	plastid	44.71	43.53
CDX84756	Canola	plastid	43.5	42.6
Bra022868.1-P	Field mustard	plastid	43.2	42.31
AT2G31840.1	Thale cress	plastid	43.5	41.14
GSMUA_Achr5P25800_001	Banana	cytosol, golgi, plastid	48.34	35.4
EES01697	Sorghum	plastid	24.17	24.54

Protein Annotations

MapMan:35.1	EntrezGene:8085142	UniProt:C5YXW1	EnsemblPlants:EES19534	ProteinID:EES19534	ProteinID:EES19534.1
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009536	GO:GO:0009570	GO:GO:0009658
GO:GO:0009987	GO:GO:0016043	PANTHER:PTHR34669	PANTHER:PTHR34669:SF1	EnsemblPlantsGene:SORBI_3009G138900	unigene:Sbi.6446
UniParc:UPI0001A893AC	RefSeq:XP_002441104.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:49619172..49621058

Molecular Weight (calculated)

37573.2 Da

IEP (calculated)

4.793

GRAVY (calculated)

-0.693

Length

331 amino acids

Sequence
(BLAST)

001: MPLHCSLPAT CSALCLRAAA RPDPRCPSSH ARLVGLALSR PRHQRLVHTG CARAGTSDSK AVQLVLGGRA RSDDDDTDSE SSDGEDSQDR MTDEERKTLR
101: RKIREMMDRV PETAGLTDPE ERRAKMRELL TKYELVVEEE DPDWPEDAED GMGFSLGQFF DKITIKAEKK DDAEEDDDSG YQSDKEIVWE DDNYIKPVRD
201: VRTQDWDASV FTDFGPMIVL VHNRYKRPRE NEMARAELTK AIEMFWEHNL PSPRCVAVDA CAEPDLVDAL KVSGFPEILF TNAGRIIHRE KVVRSAEAWS
301: RMMAFFYYKA ARPPFLCEAD GKGQEKVPLM S

Best Arabidopsis Sequence Match ( AT2G31840.2 )
(BLAST)

001: MILPFSTQFT CPVQDNGFSP SSLLSHCKRD RFEVTSLRYD SFGSVKTASS SKWNVMRSRR NVKAFGLVDK LGKKVWRKKE EDSDSEDEED EVKEETFGGK
101: EASLDDPVER REWRKTIREV IDKHPDIEED EEIDMVEKRR KMQKLLADYP LVVNEEDPNW PEDADGWGFS FNQFFNKITI KNEKKEEEDD DEDSEGDDSE
201: KEIVWQDDNY IRPIKDLTTA EWEEAVFKDI SPLMVLVHNR YKRPKENEKF REELEKAIQV IWNCGLPSPR CVAVDAVVET DLVSALKVSV FPEIIFTKAG
301: KILYREKGIR TADELSKIMA FFYYGAAKPP CLNGVVNSQE QIPLVDVSVN

Arabidopsis Description

MRL7LThioredoxin-like fold domain-containing protein MRL7L, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SKB6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.