Factsheet for GSMUA_Achr5P25800_001

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plastid, cytosol

Predictor Summary:

nucleus 2
golgi 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g071420.2.1	Tomato	cytosol	34.29	66.81
Zm00001d010261_P001	Maize	cytosol	11.95	55.67
VIT_05s0094g01460.t01	Wine grape	plastid	38.5	53.05
PGSC0003DMT400061937	Potato	plastid	37.83	50.0
KRG90572	Soybean	plastid	36.5	49.55
CDX84756	Canola	plastid	36.28	48.52
TraesCS1D01G260200.1	Wheat	plastid	35.4	48.48
TraesCS1B01G270800.1	Wheat	plastid	35.4	48.48
EES19534	Sorghum	plastid	35.4	48.34
AT2G31840.1	Thale cress	plastid	37.39	48.29
CDX79443	Canola	plastid	36.28	48.24
Bra022868.1-P	Field mustard	plastid	36.06	48.22
HORVU1Hr1G064560.5	Barley	plastid	34.51	48.0
Os05t0417200-01	Rice	plastid	33.63	46.2
TraesCS1A01G260300.2	Wheat	plastid	35.4	45.98
GSMUA_Achr3P21650_001	Banana	cytosol	12.61	42.86
Zm00001d010259_P001	Maize	nucleus	25.66	39.32

Protein Annotations

MapMan:35.1	ncoils:Coil	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009536
GO:GO:0009570	GO:GO:0009658	GO:GO:0009987	GO:GO:0016043	EnsemblPlantsGene:GSMUA_Achr5G25800_001	EnsemblPlants:GSMUA_Achr5P25800_001
EnsemblPlants:GSMUA_Achr5T25800_001	UniProt:M0T1Q5	PANTHER:PTHR34669	PANTHER:PTHR34669:SF1	UniParc:UPI000295A9CF	SEG:seg

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G25800_001]

Coordinates

chr5:-:26768267..26774651

Molecular Weight (calculated)

51736.9 Da

IEP (calculated)

4.921

GRAVY (calculated)

-0.493

Length

452 amino acids

Sequence
(BLAST)

001: MQFHNYFIAL DLCGGHPRFG SSVREDKLGF VFDAVAFLPF RLHCKITTSH GYRPQEQRPQ TPTRIAAISA AISVLLGHGG TALLVALQVF YTSSKRSNPS
101: LSSSSLRSFA CPTPDETRAL GLTFTSFCRS LFRQALYNGN CRILSSFSAM ITLPKQPTFS YTCACKLKAR ASKAVELVLG DGRDEEDARR WNSAKTESDE
201: SDEDEDEDGP SLMSEDERKE MRRKIREVLD TNLNVEEETD PVQRRIKMQK LLADYPLVVE EEDPNWPEDA DGRGFNLDQF FNKITIKNVR NDDDDYNYDS
301: DKEVVWQDDN YIRPIKDITA REWEDTVFKD FNPLVILVHN RYRRLALFLL ENEQARNELE RAVEMFWESG LPSPRCVAID ACVEHDLVDA LQVSIYPEIL
401: FTKAGKILHR DKVVRSADEW SKIMAFFYYK AVRPSCLDET AGKDEEKIPS LS

Best Arabidopsis Sequence Match ( AT2G31840.2 )
(BLAST)

001: MILPFSTQFT CPVQDNGFSP SSLLSHCKRD RFEVTSLRYD SFGSVKTASS SKWNVMRSRR NVKAFGLVDK LGKKVWRKKE EDSDSEDEED EVKEETFGGK
101: EASLDDPVER REWRKTIREV IDKHPDIEED EEIDMVEKRR KMQKLLADYP LVVNEEDPNW PEDADGWGFS FNQFFNKITI KNEKKEEEDD DEDSEGDDSE
201: KEIVWQDDNY IRPIKDLTTA EWEEAVFKDI SPLMVLVHNR YKRPKENEKF REELEKAIQV IWNCGLPSPR CVAVDAVVET DLVSALKVSV FPEIIFTKAG
301: KILYREKGIR TADELSKIMA FFYYGAAKPP CLNGVVNSQE QIPLVDVSVN

Arabidopsis Description

MRL7LThioredoxin-like fold domain-containing protein MRL7L, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SKB6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.