Factsheet for TraesCS1A01G260300.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G270800.1	Wheat	plastid	91.38	96.36
TraesCS1D01G260200.1	Wheat	plastid	89.08	93.94
HORVU1Hr1G064560.5	Barley	plastid	87.36	93.54
Zm00001d010261_P001	Maize	cytosol	19.54	70.1
EES19534	Sorghum	plastid	66.38	69.79
Os05t0417200-01	Rice	plastid	62.36	65.96
Solyc04g071420.2.1	Tomato	cytosol	39.37	59.05
Zm00001d010259_P001	Maize	nucleus	47.13	55.59
VIT_05s0094g01460.t01	Wine grape	plastid	43.97	46.65
KRG90572	Soybean	plastid	43.97	45.95
PGSC0003DMT400061937	Potato	plastid	43.68	44.44
CDX79443	Canola	plastid	41.67	42.65
CDX84756	Canola	plastid	41.09	42.31
AT2G31840.1	Thale cress	plastid	42.53	42.29
Bra022868.1-P	Field mustard	plastid	40.8	42.01
GSMUA_Achr5P25800_001	Banana	cytosol, golgi, plastid	45.98	35.4
TraesCS3A01G349000.1	Wheat	mitochondrion, plastid	25.86	27.36

Protein Annotations

EnsemblPlants:TraesCS1A01G260300.2	EnsemblPlantsGene:TraesCS1A01G260300	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009536
GO:GO:0009570	GO:GO:0009658	GO:GO:0009987	GO:GO:0016043	PANTHER:PTHR34669	PANTHER:PTHR34669:SF1
SEG:seg	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr1A:+:454335679..454339485

Molecular Weight (calculated)

39282.5 Da

IEP (calculated)

4.780

GRAVY (calculated)

-0.565

Length

348 amino acids

Sequence
(BLAST)

001: MALRCSLPAT CSTFCLTRAE HPSSRALPAR LVVSFGSCPR SRPSLGPVLA ARPWALRASD PKAGRLVIGG GPRSADADTD SDDDDDGPVR MTDQERRTLR
101: RKIREMMDRM PETQELTDPE EKKAKMRELL TKYQLVVEEE DPEWPEDAQD GMGFGLDQFF DKITIKPEKR DDADDDDAVD DGKKEVVWED DNYIKPVRDV
201: RTKDWDDTVF TDFGPLIVLV HNRYKRPQDN EMARTELVKA IETFWEHDLP SPRCVAVDAC AEPDLVAALK VSGFPELLFT NAGKILHREK DSSHSVIRFT
301: DPRSLVLIAV RSAEVLARMI AFFYYKAVRP PCLSESDGQG QEKVPLMS

Best Arabidopsis Sequence Match ( AT2G31840.2 )
(BLAST)

001: MILPFSTQFT CPVQDNGFSP SSLLSHCKRD RFEVTSLRYD SFGSVKTASS SKWNVMRSRR NVKAFGLVDK LGKKVWRKKE EDSDSEDEED EVKEETFGGK
101: EASLDDPVER REWRKTIREV IDKHPDIEED EEIDMVEKRR KMQKLLADYP LVVNEEDPNW PEDADGWGFS FNQFFNKITI KNEKKEEEDD DEDSEGDDSE
201: KEIVWQDDNY IRPIKDLTTA EWEEAVFKDI SPLMVLVHNR YKRPKENEKF REELEKAIQV IWNCGLPSPR CVAVDAVVET DLVSALKVSV FPEIIFTKAG
301: KILYREKGIR TADELSKIMA FFYYGAAKPP CLNGVVNSQE QIPLVDVSVN

Arabidopsis Description

MRL7LThioredoxin-like fold domain-containing protein MRL7L, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SKB6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.