Factsheet for PGSC0003DMT400061937

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
extracellular 1
mitochondrion 2
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g071420.2.1	Tomato	cytosol	66.96	98.71
VIT_05s0094g01460.t01	Wine grape	plastid	58.77	61.28
CDX84756	Canola	plastid	57.02	57.69
Bra022868.1-P	Field mustard	plastid	56.73	57.4
CDX79443	Canola	plastid	55.56	55.88
AT2G31840.1	Thale cress	plastid	56.14	54.86
KRG90572	Soybean	plastid	52.92	54.35
Zm00001d010261_P001	Maize	cytosol	13.45	47.42
HORVU1Hr1G064560.5	Barley	plastid	44.44	46.77
TraesCS1B01G270800.1	Wheat	plastid	44.15	45.76
TraesCS1D01G260200.1	Wheat	plastid	43.86	45.45
EES19534	Sorghum	plastid	43.57	45.02
Os05t0417200-01	Rice	plastid	42.4	44.07
TraesCS1A01G260300.2	Wheat	plastid	44.44	43.68
GSMUA_Achr5P25800_001	Banana	cytosol, golgi, plastid	50.0	37.83
Zm00001d010259_P001	Maize	nucleus	30.7	35.59
PGSC0003DMT400036037	Potato	plastid	24.85	24.43

Protein Annotations

EntrezGene:102587975	MapMan:35.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009536
GO:GO:0009570	GO:GO:0009658	GO:GO:0009987	GO:GO:0016043	UniProt:M1C8A1	EnsemblPlantsGene:PGSC0003DMG400024105
PGSC:PGSC0003DMG400024105	EnsemblPlants:PGSC0003DMT400061937	PANTHER:PTHR34669	PANTHER:PTHR34669:SF1	UniParc:UPI0002955C84	RefSeq:XP_006359817.1
SEG:seg	:	:	:	:	:

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400024105]

Coordinates

chr4:+:59951965..59956851

Molecular Weight (calculated)

39600.9 Da

IEP (calculated)

4.713

GRAVY (calculated)

-0.687

Length

342 amino acids

Sequence
(BLAST)

001: MELQHSLRLQ LLAPPLQEKC LRSSPSVFGI VPQWRNKLRS SALSSLKLNN FGPSVPKFWR SQLMVHGLRQ KGSKASKLEE LLKFGNGEED DGDESESDSD
101: GGPKRDDYFH MDEDERREWR RKIRDVIKMS PDVEEEVDPV ERRQKMQKLL ADYPLVVDEE DPDWPEDADG RGFNLDQFFN KISIKNVKKD DDENDDDNEL
201: VWQDDDYIRP VKDLTTAEWE ETVYKDISPL IVLVHNRYKR PKENEMVRDE LEKAIHIIWN CRLPSPRCVA IDAVVEVDLV SALKVSVFPE LIFTKAGKIL
301: YREKVSRTAD ELSKMMAFFY YGAAKPPCLS GIENSQELIP TV

Best Arabidopsis Sequence Match ( AT2G31840.2 )
(BLAST)

001: MILPFSTQFT CPVQDNGFSP SSLLSHCKRD RFEVTSLRYD SFGSVKTASS SKWNVMRSRR NVKAFGLVDK LGKKVWRKKE EDSDSEDEED EVKEETFGGK
101: EASLDDPVER REWRKTIREV IDKHPDIEED EEIDMVEKRR KMQKLLADYP LVVNEEDPNW PEDADGWGFS FNQFFNKITI KNEKKEEEDD DEDSEGDDSE
201: KEIVWQDDNY IRPIKDLTTA EWEEAVFKDI SPLMVLVHNR YKRPKENEKF REELEKAIQV IWNCGLPSPR CVAVDAVVET DLVSALKVSV FPEIIFTKAG
301: KILYREKGIR TADELSKIMA FFYYGAAKPP CLNGVVNSQE QIPLVDVSVN

Arabidopsis Description

MRL7LThioredoxin-like fold domain-containing protein MRL7L, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SKB6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.