Factsheet for VIT_05s0094g01460.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g071420.2.1	Tomato	cytosol	56.1	79.31
PGSC0003DMT400061937	Potato	plastid	61.28	58.77
CDX79443	Canola	plastid	59.45	57.35
KRG90572	Soybean	plastid	57.62	56.76
CDX84756	Canola	plastid	57.93	56.21
AT2G31840.1	Thale cress	plastid	59.76	56.0
Bra022868.1-P	Field mustard	plastid	57.62	55.92
Zm00001d010261_P001	Maize	cytosol	14.33	48.45
TraesCS1D01G260200.1	Wheat	plastid	47.56	47.27
HORVU1Hr1G064560.5	Barley	plastid	46.34	46.77
TraesCS1B01G270800.1	Wheat	plastid	46.65	46.36
EES19534	Sorghum	plastid	45.73	45.32
Os05t0417200-01	Rice	plastid	44.82	44.68
TraesCS1A01G260300.2	Wheat	plastid	46.65	43.97
GSMUA_Achr5P25800_001	Banana	cytosol, golgi, plastid	53.05	38.5
Zm00001d010259_P001	Maize	nucleus	32.32	35.93
VIT_07s0005g03800.t01	Wine grape	plastid	25.0	25.15

Protein Annotations

EntrezGene:100245762	wikigene:100245762	MapMan:35.1	ProteinID:CBI24762	ProteinID:CBI24762.3	UniProt:D7T2N1
EMBL:FN595507	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009536	GO:GO:0009570
GO:GO:0009658	GO:GO:0009987	GO:GO:0016043	EntrezGene:LOC100245762	wikigene:LOC100245762	PANTHER:PTHR34669
PANTHER:PTHR34669:SF1	UniParc:UPI0001983501	ArrayExpress:VIT_05s0094g01460	EnsemblPlantsGene:VIT_05s0094g01460	EnsemblPlants:VIT_05s0094g01460.t01	RefSeq:XP_002276129
RefSeq:XP_002276129.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5:-:24750588..24753746

Molecular Weight (calculated)

37449.2 Da

IEP (calculated)

4.792

GRAVY (calculated)

-0.651

Length

328 amino acids

Sequence
(BLAST)

001: MALQNTITGF QHMLSAAVTP RQTNPRLESF CLSFSSQAFP NSPFLSINRG RRRRSGLRAS TTPHKLKSND GDQDSSDSDS EGENDDAPIM SDEERREWRS
101: KIRQVIDGNP DVEEEMDPVL KRRMMQKLLA DYPLVVEEDD PNWPEDADGR GFNLDQFFDK ITIKNVKKDK GDDDNYDSED EIVWQDDNYI RPIKDIKTAE
201: WEETVLKDIS PLIVLVHNRY KRPKENQKIR EELEKAVHII WNCRLPSPRC VAIDAVVEVD LVSALQVSVF PEVIFTKAGK ILHREKVIQT ADELSKIMAF
301: FYYGAAKPPC LNGTGDSQEA IPLVPIKS

Best Arabidopsis Sequence Match ( AT2G31840.2 )
(BLAST)

001: MILPFSTQFT CPVQDNGFSP SSLLSHCKRD RFEVTSLRYD SFGSVKTASS SKWNVMRSRR NVKAFGLVDK LGKKVWRKKE EDSDSEDEED EVKEETFGGK
101: EASLDDPVER REWRKTIREV IDKHPDIEED EEIDMVEKRR KMQKLLADYP LVVNEEDPNW PEDADGWGFS FNQFFNKITI KNEKKEEEDD DEDSEGDDSE
201: KEIVWQDDNY IRPIKDLTTA EWEEAVFKDI SPLMVLVHNR YKRPKENEKF REELEKAIQV IWNCGLPSPR CVAVDAVVET DLVSALKVSV FPEIIFTKAG
301: KILYREKGIR TADELSKIMA FFYYGAAKPP CLNGVVNSQE QIPLVDVSVN

Arabidopsis Description

MRL7LThioredoxin-like fold domain-containing protein MRL7L, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SKB6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.