Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400061937 | Potato | plastid | 98.71 | 66.96 |
| VIT_05s0094g01460.t01 | Wine grape | plastid | 79.31 | 56.1 |
| CDX84756 | Canola | plastid | 76.72 | 52.66 |
| Bra022868.1-P | Field mustard | plastid | 76.29 | 52.37 |
| CDX79443 | Canola | plastid | 75.86 | 51.76 |
| AT2G31840.1 | Thale cress | plastid | 76.29 | 50.57 |
| KRG90572 | Soybean | plastid | 71.98 | 50.15 |
| Zm00001d010261_P001 | Maize | cytosol | 19.83 | 47.42 |
| HORVU1Hr1G064560.5 | Barley | plastid | 59.48 | 42.46 |
| TraesCS1B01G270800.1 | Wheat | plastid | 59.05 | 41.52 |
| TraesCS1D01G260200.1 | Wheat | plastid | 59.05 | 41.52 |
| EES19534 | Sorghum | plastid | 58.19 | 40.79 |
| Os05t0417200-01 | Rice | plastid | 57.76 | 40.73 |
| TraesCS1A01G260300.2 | Wheat | plastid | 59.05 | 39.37 |
| GSMUA_Achr5P25800_001 | Banana | cytosol, golgi, plastid | 66.81 | 34.29 |
| Zm00001d010259_P001 | Maize | nucleus | 39.22 | 30.85 |
| Solyc02g079730.2.1 | Tomato | plastid | 35.78 | 22.74 |
Protein Annotations
| MapMan:35.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009536 | GO:GO:0009570 |
| GO:GO:0009658 | GO:GO:0009987 | GO:GO:0016043 | InterPro:IPR001849 | UniProt:K4BTD4 | InterPro:PH_domain |
| PFscan:PS50003 | PANTHER:PTHR34669 | PANTHER:PTHR34669:SF1 | EnsemblPlantsGene:Solyc04g071420.2 | EnsemblPlants:Solyc04g071420.2.1 | UniParc:UPI0002766848 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr4:+:58400905..58403132
Molecular Weight (calculated)
27224.2 Da
IEP (calculated)
4.398
GRAVY (calculated)
-0.653
Length
232 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEDERREWR RKIRDVIKMS PDVEEEVDPV ERRQKMQKLL ADYPLVVDEE DPDWPEDADG RGFNLDQFFN KISIKNVKKD DDENDDDNEL VWQDDDYIRP
101: VKDLTTAEWE ETVYKDISPL IVLVHNRYKR PKENEMARDE LEKAIHIIWN CRLPSPRCVA IDAVVEVDLV SALKVSVFPE LIFTKAGKIL YREKVSRTAD
201: ELSKMMAFFY YGAAKPPCLS SIENSQELIP TI
101: VKDLTTAEWE ETVYKDISPL IVLVHNRYKR PKENEMARDE LEKAIHIIWN CRLPSPRCVA IDAVVEVDLV SALKVSVFPE LIFTKAGKIL YREKVSRTAD
201: ELSKMMAFFY YGAAKPPCLS SIENSQELIP TI
001: MILPFSTQFT CPVQDNGFSP SSLLSHCKRD RFEVTSLRYD SFGSVKTASS SKWNVMRSRR NVKAFGLVDK LGKKVWRKKE EDSDSEDEED EVKEETFGGK
101: EASLDDPVER REWRKTIREV IDKHPDIEED EEIDMVEKRR KMQKLLADYP LVVNEEDPNW PEDADGWGFS FNQFFNKITI KNEKKEEEDD DEDSEGDDSE
201: KEIVWQDDNY IRPIKDLTTA EWEEAVFKDI SPLMVLVHNR YKRPKENEKF REELEKAIQV IWNCGLPSPR CVAVDAVVET DLVSALKVSV FPEIIFTKAG
301: KILYREKGIR TADELSKIMA FFYYGAAKPP CLNGVVNSQE QIPLVDVSVN
101: EASLDDPVER REWRKTIREV IDKHPDIEED EEIDMVEKRR KMQKLLADYP LVVNEEDPNW PEDADGWGFS FNQFFNKITI KNEKKEEEDD DEDSEGDDSE
201: KEIVWQDDNY IRPIKDLTTA EWEEAVFKDI SPLMVLVHNR YKRPKENEKF REELEKAIQV IWNCGLPSPR CVAVDAVVET DLVSALKVSV FPEIIFTKAG
301: KILYREKGIR TADELSKIMA FFYYGAAKPP CLNGVVNSQE QIPLVDVSVN
Arabidopsis Description
MRL7LThioredoxin-like fold domain-containing protein MRL7L, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SKB6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.