Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES19534 | Sorghum | plastid | 75.93 | 67.67 |
| Os05t0417200-01 | Rice | plastid | 55.59 | 49.85 |
| TraesCS1B01G270800.1 | Wheat | plastid | 54.24 | 48.48 |
| HORVU1Hr1G064560.5 | Barley | plastid | 53.22 | 48.31 |
| TraesCS1D01G260200.1 | Wheat | plastid | 52.88 | 47.27 |
| TraesCS1A01G260300.2 | Wheat | plastid | 55.59 | 47.13 |
| Solyc04g071420.2.1 | Tomato | cytosol | 30.85 | 39.22 |
| VIT_05s0094g01460.t01 | Wine grape | plastid | 35.93 | 32.32 |
| KRG90572 | Soybean | plastid | 35.59 | 31.53 |
| PGSC0003DMT400061937 | Potato | plastid | 35.59 | 30.7 |
| CDX79443 | Canola | plastid | 35.25 | 30.59 |
| AT2G31840.1 | Thale cress | plastid | 35.59 | 30.0 |
| CDX84756 | Canola | plastid | 34.24 | 29.88 |
| Bra022868.1-P | Field mustard | plastid | 33.9 | 29.59 |
| GSMUA_Achr5P25800_001 | Banana | cytosol, golgi, plastid | 39.32 | 25.66 |
| Zm00001d043009_P002 | Maize | plastid | 18.31 | 16.51 |
| Zm00001d010261_P001 | Maize | cytosol | 2.03 | 6.19 |
Protein Annotations
| EnsemblPlants:Zm00001d010259_P001 | EnsemblPlants:Zm00001d010259_T001 | EnsemblPlantsGene:Zm00001d010259 | PANTHER:PTHR34669 | PANTHER:PTHR34669:SF1 | ProteinID:AQK93752.1 |
| SEG:seg | UniParc:UPI0008443926 | UniProt:A0A1D6FQ47 | MapMan:35.1 | : | : |
Description
Thioredoxin superfamily protein
Coordinates
chr8:+:106433937..106440262
Molecular Weight (calculated)
33372.7 Da
IEP (calculated)
4.460
GRAVY (calculated)
-0.833
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQEGHDAAT VSTVALADGD LSPEESRGVE KSGDCVVGST MALHCSLPAT CSTLWLRAAA RPDPRFPRSR ARLVGLALSG PRHRRLVHTG CARAGTSDSK
101: AVELVLGGRA RGDDGDTDSE SSDEEDAQDR MTDEERRTLR RKIREMMDRV PETAELTDPE ERRVKMRELL TKYELVVEEE DPDWPEDAED GMGFSLGQFF
201: DKITIKAEKK DDTEEDDVSG YQSDKEIVWE DDNYIRPVRD VRTQDWDASV FTDFGPMVVL VHNRYKRPQE NETARAELTK AIEMFWEHNL PSPRV
101: AVELVLGGRA RGDDGDTDSE SSDEEDAQDR MTDEERRTLR RKIREMMDRV PETAELTDPE ERRVKMRELL TKYELVVEEE DPDWPEDAED GMGFSLGQFF
201: DKITIKAEKK DDTEEDDVSG YQSDKEIVWE DDNYIRPVRD VRTQDWDASV FTDFGPMVVL VHNRYKRPQE NETARAELTK AIEMFWEHNL PSPRV
001: MILPFSTQFT CPVQDNGFSP SSLLSHCKRD RFEVTSLRYD SFGSVKTASS SKWNVMRSRR NVKAFGLVDK LGKKVWRKKE EDSDSEDEED EVKEETFGGK
101: EASLDDPVER REWRKTIREV IDKHPDIEED EEIDMVEKRR KMQKLLADYP LVVNEEDPNW PEDADGWGFS FNQFFNKITI KNEKKEEEDD DEDSEGDDSE
201: KEIVWQDDNY IRPIKDLTTA EWEEAVFKDI SPLMVLVHNR YKRPKENEKF REELEKAIQV IWNCGLPSPR CVAVDAVVET DLVSALKVSV FPEIIFTKAG
301: KILYREKGIR TADELSKIMA FFYYGAAKPP CLNGVVNSQE QIPLVDVSVN
101: EASLDDPVER REWRKTIREV IDKHPDIEED EEIDMVEKRR KMQKLLADYP LVVNEEDPNW PEDADGWGFS FNQFFNKITI KNEKKEEEDD DEDSEGDDSE
201: KEIVWQDDNY IRPIKDLTTA EWEEAVFKDI SPLMVLVHNR YKRPKENEKF REELEKAIQV IWNCGLPSPR CVAVDAVVET DLVSALKVSV FPEIIFTKAG
301: KILYREKGIR TADELSKIMA FFYYGAAKPP CLNGVVNSQE QIPLVDVSVN
Arabidopsis Description
MRL7LThioredoxin-like fold domain-containing protein MRL7L, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SKB6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.