CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra022868.1-P	Field mustard	plastid	99.41	99.41
CDX79443	Canola	plastid	90.24	89.71
Solyc04g071420.2.1	Tomato	cytosol	52.66	76.72
AT2G31840.1	Thale cress	plastid	73.96	71.43
VIT_05s0094g01460.t01	Wine grape	plastid	56.21	57.93
PGSC0003DMT400061937	Potato	plastid	57.69	57.02
KRG90572	Soybean	plastid	55.62	56.46
HORVU1Hr1G064560.5	Barley	plastid	42.9	44.62
Zm00001d010261_P001	Maize	cytosol	12.72	44.33
TraesCS1D01G260200.1	Wheat	plastid	42.9	43.94
TraesCS1B01G270800.1	Wheat	plastid	42.6	43.64
EES19534	Sorghum	plastid	42.6	43.5
TraesCS1A01G260300.2	Wheat	plastid	42.31	41.09
Os05t0417200-01	Rice	plastid	39.94	41.03
GSMUA_Achr5P25800_001	Banana	cytosol, golgi, plastid	48.52	36.28
Zm00001d010259_P001	Maize	nucleus	29.88	34.24

Protein Annotations

EnsemblPlants:CDX84756	EnsemblPlantsGene:GSBRNA2T00142047001	Gene3D:3.40.30.10	InterPro:Thioredoxin-like_sf	ncoils:Coil	PANTHER:PTHR34669
PANTHER:PTHR34669:SF1	ProteinID:CDX84756	ProteinID:CDX84756.1	SEG:seg	SUPFAM:SSF52833	UniParc:UPI0004EDCAA6
MapMan:35.1	:	:	:	:	:

Description

BnaA03g14740D

Coordinates

chrLK031838:+:1101903..1103776

Molecular Weight (calculated)

38978.8 Da

IEP (calculated)

4.586

GRAVY (calculated)

-0.682

Length

338 amino acids

Sequence
(BLAST)

001: MILPYSTRVT SPVNGFIITP PLFSGVSASA LCKRNGFEVP SSRYECSASV NMKVNVTRSR RNVKAFGLVD KLGKKSWRNK EESDSEDEED EVKKDTSDKR
101: SASLDDPEER REWRQKIREV IDSHPDVEEE EIDMVEKRRK MQKLLADYPL VVNEEDPDWP EDADGWGFSF NQFFNKITIK NEKKDDDDDD DKEIVWQDDN
201: YIRPIKDLTT AEWEEAVFKD ISPLMVLVHN RYKRPKENEK FREELDKAIQ VIWNCGLPSP RCVAVDAVVE TDLVSALQVT VFPEIIFTKA GKILYREKGI
301: RTADDLSKIM AFFYYGAAKP PCLNGVDYSQ EQIPSVDL

Best Arabidopsis Sequence Match ( AT2G31840.2 )
(BLAST)

001: MILPFSTQFT CPVQDNGFSP SSLLSHCKRD RFEVTSLRYD SFGSVKTASS SKWNVMRSRR NVKAFGLVDK LGKKVWRKKE EDSDSEDEED EVKEETFGGK
101: EASLDDPVER REWRKTIREV IDKHPDIEED EEIDMVEKRR KMQKLLADYP LVVNEEDPNW PEDADGWGFS FNQFFNKITI KNEKKEEEDD DEDSEGDDSE
201: KEIVWQDDNY IRPIKDLTTA EWEEAVFKDI SPLMVLVHNR YKRPKENEKF REELEKAIQV IWNCGLPSPR CVAVDAVVET DLVSALKVSV FPEIIFTKAG
301: KILYREKGIR TADELSKIMA FFYYGAAKPP CLNGVVNSQE QIPLVDVSVN

Arabidopsis Description

MRL7LThioredoxin-like fold domain-containing protein MRL7L, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SKB6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.