CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
nucleus 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g071420.2.1	Tomato	cytosol	50.15	71.98
VIT_05s0094g01460.t01	Wine grape	plastid	56.76	57.62
CDX79443	Canola	plastid	57.66	56.47
CDX84756	Canola	plastid	56.46	55.62
Bra022868.1-P	Field mustard	plastid	56.16	55.33
AT2G31840.1	Thale cress	plastid	55.86	53.14
PGSC0003DMT400061937	Potato	plastid	54.35	52.92
TraesCS1D01G260200.1	Wheat	plastid	45.95	46.36
HORVU1Hr1G064560.5	Barley	plastid	44.44	45.54
TraesCS1B01G270800.1	Wheat	plastid	44.74	45.15
Zm00001d010261_P001	Maize	cytosol	12.91	44.33
EES19534	Sorghum	plastid	43.84	44.11
TraesCS1A01G260300.2	Wheat	plastid	45.95	43.97
Os05t0417200-01	Rice	plastid	43.24	43.77
GSMUA_Achr5P25800_001	Banana	cytosol, golgi, plastid	49.55	36.5
Zm00001d010259_P001	Maize	nucleus	31.53	35.59
KRH42851	Soybean	mitochondrion	23.42	21.02
KRH58946	Soybean	plastid	23.42	20.91

Protein Annotations

EntrezGene:100793560	MapMan:35.1	EMBL:ACUP02012626	EnsemblPlantsGene:GLYMA_20G100000	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009536	GO:GO:0009570	GO:GO:0009658	GO:GO:0009987	GO:GO:0016043
UniProt:I1NF24	EnsemblPlants:KRG90572	ProteinID:KRG90572	ProteinID:KRG90572.1	ProteinID:KRG90573.1	PANTHER:PTHR34669
PANTHER:PTHR34669:SF1	UniParc:UPI000233EED6	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr20:+:34319632..34322794

Molecular Weight (calculated)

38558.4 Da

IEP (calculated)

4.604

GRAVY (calculated)

-0.726

Length

333 amino acids

Sequence
(BLAST)

001: MALPHSIILP FSSIISPCCL PKHKPTNFTL PFKLNGDSCR SIRIPSRVQA LKSDGGKWKK RGQEASSDTD DDDDDDDAPQ RFNKNDPYLM SPEERLEWRR
101: NIRQVLDRKP DVEEELDPLE KKKKLEKLLE DYPLVVDEDD PDWPEDADGW GFSLGQFFDK ITIKNKKKDD DDDDDNDDVD RPEIMWQDDN YIRPIKDIKT
201: AEWEETVFKD ISPLIILVHN RYKRPKENEK IRDELEKAVH IIWNCRLPSP RCVAIDAVVE TELVAALQVS IFPEIIFTKA GKILFRDKAI RSAEEWSKVM
301: AYFYYGAAKP SCLNSLTYSQ ENIPSIVTDN PVS

Best Arabidopsis Sequence Match ( AT2G31840.2 )
(BLAST)

001: MILPFSTQFT CPVQDNGFSP SSLLSHCKRD RFEVTSLRYD SFGSVKTASS SKWNVMRSRR NVKAFGLVDK LGKKVWRKKE EDSDSEDEED EVKEETFGGK
101: EASLDDPVER REWRKTIREV IDKHPDIEED EEIDMVEKRR KMQKLLADYP LVVNEEDPNW PEDADGWGFS FNQFFNKITI KNEKKEEEDD DEDSEGDDSE
201: KEIVWQDDNY IRPIKDLTTA EWEEAVFKDI SPLMVLVHNR YKRPKENEKF REELEKAIQV IWNCGLPSPR CVAVDAVVET DLVSALKVSV FPEIIFTKAG
301: KILYREKGIR TADELSKIMA FFYYGAAKPP CLNGVVNSQE QIPLVDVSVN

Arabidopsis Description

MRL7LThioredoxin-like fold domain-containing protein MRL7L, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SKB6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.