Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0417200-01 | Rice | plastid | 74.23 | 21.88 |
| TraesCS1B01G270800.1 | Wheat | plastid | 71.13 | 20.91 |
| TraesCS1D01G260200.1 | Wheat | plastid | 71.13 | 20.91 |
| HORVU1Hr1G064560.5 | Barley | plastid | 69.07 | 20.62 |
| Solyc04g071420.2.1 | Tomato | cytosol | 47.42 | 19.83 |
| TraesCS1A01G260300.2 | Wheat | plastid | 70.1 | 19.54 |
| VIT_05s0094g01460.t01 | Wine grape | plastid | 48.45 | 14.33 |
| PGSC0003DMT400061937 | Potato | plastid | 47.42 | 13.45 |
| AT2G31840.1 | Thale cress | plastid | 47.42 | 13.14 |
| CDX79443 | Canola | plastid | 45.36 | 12.94 |
| KRG90572 | Soybean | plastid | 44.33 | 12.91 |
| Bra022868.1-P | Field mustard | plastid | 44.33 | 12.72 |
| CDX84756 | Canola | plastid | 44.33 | 12.72 |
| GSMUA_Achr5P25800_001 | Banana | cytosol, golgi, plastid | 55.67 | 11.95 |
| Zm00001d043009_P002 | Maize | plastid | 28.87 | 8.56 |
| Zm00001d010259_P001 | Maize | nucleus | 6.19 | 2.03 |
Protein Annotations
| EnsemblPlants:Zm00001d010261_P001 | EnsemblPlants:Zm00001d010261_T001 | EnsemblPlantsGene:Zm00001d010261 | Gene3D:3.40.30.10 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 | GO:GO:0045454 | InterPro:IPR013766 | InterPro:Thioredoxin-like_sf |
| InterPro:Thioredoxin_domain | PANTHER:PTHR34669 | PANTHER:PTHR34669:SF1 | PFAM:PF00085 | ProteinID:AQK93754.1 | SEG:seg |
| SUPFAM:SSF52833 | UniParc:UPI0008424462 | UniProt:A0A1D6FQ50 | MapMan:35.1 | : | : |
Description
Thioredoxin superfamily protein
Coordinates
chr8:+:106441757..106443479
Molecular Weight (calculated)
10581.8 Da
IEP (calculated)
7.185
GRAVY (calculated)
0.138
Length
97 amino acids
Sequence
(BLAST)
(BLAST)
1: MTDATATTTA NRIATIANLV CVAVDACAEP DLVDALKVSG FPEILFTNAG RIIHREKVVR SAEAWSRMMA FFYYKAARPP FLCEADGKGQ EKVPLMS
001: MILPFSTQFT CPVQDNGFSP SSLLSHCKRD RFEVTSLRYD SFGSVKTASS SKWNVMRSRR NVKAFGLVDK LGKKVWRKKE EDSDSEDEED EVKEETFGGK
101: EASLDDPVER REWRKTIREV IDKHPDIEED EEIDMVEKRR KMQKLLADYP LVVNEEDPNW PEDADGWGFS FNQFFNKITI KNEKKEEEDD DEDSEGDDSE
201: KEIVWQDDNY IRPIKDLTTA EWEEAVFKDI SPLMVLVHNR YKRPKENEKF REELEKAIQV IWNCGLPSPR CVAVDAVVET DLVSALKVSV FPEIIFTKAG
301: KILYREKGIR TADELSKIMA FFYYGAAKPP CLNGVVNSQE QIPLVDVSVN
101: EASLDDPVER REWRKTIREV IDKHPDIEED EEIDMVEKRR KMQKLLADYP LVVNEEDPNW PEDADGWGFS FNQFFNKITI KNEKKEEEDD DEDSEGDDSE
201: KEIVWQDDNY IRPIKDLTTA EWEEAVFKDI SPLMVLVHNR YKRPKENEKF REELEKAIQV IWNCGLPSPR CVAVDAVVET DLVSALKVSV FPEIIFTKAG
301: KILYREKGIR TADELSKIMA FFYYGAAKPP CLNGVVNSQE QIPLVDVSVN
Arabidopsis Description
MRL7LThioredoxin-like fold domain-containing protein MRL7L, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SKB6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.