Factsheet for GSMUA_Achr3P21650_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0829000-01	Rice	mitochondrion	78.95	33.12
EES01697	Sorghum	plastid	80.45	32.82
Zm00001d043009_P002	Maize	plastid	80.45	32.72
Bra010359.1-P	Field mustard	plastid	78.2	32.1
TraesCS3A01G349000.1	Wheat	mitochondrion, plastid	78.2	31.61
TraesCS3B01G381100.1	Wheat	mitochondrion, plastid	78.2	31.52
TraesCS3D01G342900.1	Wheat	mitochondrion, plastid	78.2	31.52
AT4G28590.1	Thale cress	plastid	78.2	31.42
VIT_07s0005g03800.t01	Wine grape	plastid	75.19	30.67
PGSC0003DMT400036037	Potato	plastid	76.69	29.31
HORVU3Hr1G087940.4	Barley	cytosol, plastid	78.2	28.49
Solyc02g079730.2.1	Tomato	plastid	76.69	27.95
KRH42851	Soybean	mitochondrion	72.93	26.15
KRH58946	Soybean	plastid	72.93	26.01
GSMUA_Achr5P25800_001	Banana	cytosol, golgi, plastid	42.86	12.61

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009536
GO:GO:0009658	GO:GO:0009987	GO:GO:0016043	GO:GO:0019725	GO:GO:0042644	GO:GO:0045454
EnsemblPlantsGene:GSMUA_Achr3G21650_001	EnsemblPlants:GSMUA_Achr3P21650_001	EnsemblPlants:GSMUA_Achr3T21650_001	InterPro:IPR013766	UniProt:M0SGN1	PFAM:PF00085
PANTHER:PTHR34669	PANTHER:PTHR34669:SF2	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI0002969815
SEG:seg	:	:	:	:	:

Description

thioredoxin, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G21650_001]

Coordinates

chr3:+:22599667..22602396

Molecular Weight (calculated)

15764.0 Da

IEP (calculated)

8.660

GRAVY (calculated)

-0.373

Length

133 amino acids

Sequence
(BLAST)

001: MDEGWVKEIN CLEWESFAFH PSPLVVLVFE RYNRAAHNWK LLKELEKAAK VYWDAKDRLP PRTIKIDINI EKDLAYALNV KACPELLFLK GNKILYREKE
101: FRTSDELVQM IAHFYYNAKR PSWVDSARVS SPF

Best Arabidopsis Sequence Match ( AT4G28590.1 )
(BLAST)

001: MSFFAVACSA PRSSMLLTGL NSSFSDMHRS PLFVFPVTIS SRSVKRFAAV SSDSVLDPES KNQTRSRRKN KEAVTPIAET ENNEKFPTKV PRKSKRGRRS
101: EADAVEDYVR SSLERTFSTI KEQNPEVFEN KEKANFIKDR GVDEEEEEEE EMVVEEEDPD WPVDTDVGWG IKASEYFDTH PIKNVVGDDG SEIDWEGEID
201: DSWVKEINCL EWESFAFHPS PLVVLVFERY KRASDNWKTL KELEKAIKVY WDAKDRLPPR AVKIDLNIET DLAYALKAKE CPQILFLRGN RILYREKDFR
301: TADELVHMIA HFYYKAKRPS CVDKANVTPY C

Arabidopsis Description

MRL7FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily pr /.../(TAIR:AT2G31840.1); Has 114 Blast hits to 112 proteins in 39 species: Archae - 2; Bacteria - 0; Metazoa - 17; Fungi - 6; Plants - 67; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). [Source:TAIR;Acc:AT4G28590]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.